Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00786 atggagtgcGAGCTGTGTGGGAAGCGAGCCACGATGTACTGCGAATCGGACCAGGCTAAGCTGTGCTGGGGTTGCGACGAGAAGGTCCACGGTGCTAACTTTCTTGTGGCGAAGCACAATAGGATTCTCCTCTGCCGGGCTTGTCAATCTCCGACTCCATGGAATGCCTGTGGGCCAAAGCTCACTCCTACAACTTCCGTTTGTGATCGGTGCGTCACCAATCACTCTAAAAAATGCGAGCGATCTAACGGCGATGATGAACGAGAAGAGGATCATAATTATGATTCTGACGATGATTATGAATCTTTCGATGAGGGTTCTGGTAACaattatgatgatgatgatgatgaagaagaggaagaggaggaggaggaagagggGGAGAACCAGGTGGTGCCATGGTCCTTTGATCCGTTGCCTTCACATGTTCCGGCGAGTTCCATCAATAGCGACAGCGACGGAGATATATCGAACTCCATTGGTGGTGCTGATTTACGATTGAAACGGTTGCGAGAGAATTCCCTCGTTGATTCAGATGATGAGAATGAGATGGGGTGCTCGTCATCTACGGCATTACCCAACGATGAAAGGACATCCATGAGATTATTCAGGCCATTGAAGCAGCCTCACCGTTGGTA 638 0.4498 MECELCGKRATMYCESDQAKLCWGCDEKVHGANFLVAKHNRILLCRACQSPTPWNACGPKLTPTTSVCDRCVTNHSKKCERSNGDDEREEDHNYDSDDDYESFDEGSGNNYDDDDDEEEEEEEEEEGENQVVPWSFDPLPSHVPASSINSDSDGDISNSIGGADLRLKRLRENSLVDSDDENEMGCSSSTALPNDERTSMRLFRPLKQPHRW 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00786 212 PANTHER OS08G0178800 PROTEIN 2 192 - -
Bva09g00786 212 MobiDBLite consensus disorder prediction 180 196 - -
Bva09g00786 212 SMART bboxneu5 1 44 IPR000315 GO:0008270
Bva09g00786 212 MobiDBLite consensus disorder prediction 142 157 - -
Bva09g00786 212 ProSiteProfiles Zinc finger B-box type profile. 1 44 IPR000315 GO:0008270
Bva09g00786 212 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 192 - -
Bva09g00786 212 MobiDBLite consensus disorder prediction 76 212 - -
Bva09g00786 212 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Bva09g00786 212 CDD Bbox1_BBX-like 3 44 - -
Bva09g00786 212 MobiDBLite consensus disorder prediction 90 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00786 Bva-Chr9 4050248 4051668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00786 2 189 C2C2-CO-like Transcription Factor Family AT4G27310 44.498 1.38e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva09g00786 zf-B_box 7.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00786 - - csv:101209141 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00786 09 4050248 4051668 Bva09g00786 09 4050248 4051668 ECH