Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00781 ATGGATTTGTATGTTCGAGTGCAAGCTTCAGAATTAGAGTCAAATAATGGACGCAAGGTCAAGGTTGGAGTTGCTGTAGGAAGTACCATTGCGGCAATAGTTGTGTTGCTCTTGGTTCTCTATTTTGTAtgcagaaggagaagaagggtCACCTCAAAAGAAAGCGTGGTGATGAGGGAGCAattcaaagaagaagaaaaggaagaccTGGAGCTTCCATTGTTTGATCTAGCAAGAATAGTTAGCGCTACtgataatttttcaatcaGCAATAAGCTTGGAGAAGGTGGTTTTGGACCCGTATACAAGGGGACACTAGATGGTGGACAAGAAATAGCTGGTGAAGAGAAATTGCTGATATACGAATACATGCCTAACAAAAGCTTGGATTCCTTTATATTTGatcaaacaaggaaaaagCTTTTGAATTGGTCTAAGCGCTACCACATTATTTGTGAGATTGCTAGGGGTCTTCTCTATCTTCATCAAGATTCCAGATTAAGAATAATTCATAGAGATTTAAAAGcaagtaatattttacttgataATGAGATGAATTCAAAGATTTCAGACTTTGGTTTGGCAAGAATCTTGGGAGAAGACCAAAATACAGATATAACACACCGAGTGGCTGGAACTTATGGATACATGGCACCTGAATATGCCTTAGATGGGAACTTTTCTATCAAATCAGATGTATTTAGCTTTGGCATTTTGTTGCTTGAGATAATAACCggaaagaaaaacagaggAAACTACCATCAAAGAGAAAGCATTAACCTTATTGGATATGCATGGGATTTGTGGATTGAAGGGAAACTTACAGAGCTGATTGATGAATGCCTCAAGGACTCTTGCAATTATCTGGCCGGTGGTCAAGATCTTTATATTCGAATGCCTGCTTCAGAATTGGAAACAGAAGAACGCAGGCATAAGAAGTTGACTGTAATAGTTGTTACCTCTGTTGTTCCAGTCACCCTGGTGATTTTGCTTGTTTGCTATTACACTCACAAAGCCCGCCGGAAAACAACAGAGGAATCCGAAGGTACTGATGGAGGACAGGCAGATGATTTGGATCTCCCGTTAATTGATTTGTCAATAATTGCTACTGCTACTGATAACTTCTCAATGAGCAACAAGATTGGAGAAGGTGGTTTTGGTCCTGTATACAAGGGAATATTACATGGGCAAGAAATTGCCGTGAAGAGGCTTTCAACACTCTCTGGGCAAGGAATAATTGAATTCAAGAATGAAGTTAAATTGATTGCTAAACTTCAACACCGAAATCTTGTAAAGCTTCATGGCTGTTGTATTCAAGGACAAGAAAAGATGCTGGTTTATGAATACATGCCTAATAGTAGCTTAGACTCCTTcatttttgATCATACTAAAGACTTTGGCATAGCTAGAAGTTGCGGAGGAGACCAAACCGAAGGAAGCACAAATAGAATAATTGGAACTTATGGTTATATGGCACCAGAATATGTTGTTCATGgtttattttcagtaaaatcaGATGTCTTTAGCTTTGGTATTTTGTTACTGGAGATCATATGTGGGAAGAAAAGTAAAGAGTCTTATCATACAGGCCACACCCTTATTGGTCATGCATGGATATCTTGGAAAGAGGGAAGAGCTTCAGAATTGATCGACCCGAACATAGAAGAGAACTCGTGCATCTCATCACAGGATCTTTATGTTCGAATGCCTGCTTCAGAATTGGAAGCTGAACAAGGCAGGCATAAGAAGTTGACAGTAATAGTTGTTATCTCTATTGTTCCAGTTGCCGGGGTGATTTTGCTTGTTTACTATTACACCCACAAAGCCCGCAGGAAAACGACAGAGGAGTCCGAAGGTACTGATGGAGGACAGACAGGTGATTTGGATCTCCCATTGTTTGATTTGTCAATAATTGCTACCGCTACTGATAACTTCTCAATGAGCAACAAGATTGGAGAAGGTGGTTTTGGTCCTGTATATAAGGGAATATTACATGGGCAAGAAATTGCTGTGAAAAGGCTTTCAACACATTCTTGGCAAGGAATGAttgaattcaaaaatgaaGTTAAATTGATTGCTAAACTTCAACACCGGAATCTTGTGAAGATTCATGGTTATTGCATTCAAGGACAAGAAAAGATGTTGATTTATGAATTCATGCCTAATAGTAGCTTAGACTCCTTcatttttgATCACGCTAAAGACTTTGGCATAGCTAGAAGTTGCGGAGCAGACCAAACAGAAGGAAACACAAATAGAATAATTGGAACTTATGGCTATATGGCACCAGAATATGTTGTTCATGGGTTATTTTCAGTGAAGTCCGATGTCTTTAGCTTTGGTATTTTGTTACTTGAAATCATATGTGGGAAGAAAAGTAAAGAGTTTTATCATGCAGGCCATACCCTTATTGGTCATGCATGGATATCTTGGAAAGAGGGAAGAGCTTTAGAACTGATCGACCCAAACATAGAAGAGGGCTCTTGCATTGCATCACAGGCATGGATACTGGGCAAGAAGGCAGGCCATTA 2531 0.3726 MDLYVRVQASELESNNGRKVKVGVAVGSTIAAIVVLLLVLYFVCRRRRRVTSKESVVMREQFKEEEKEDLELPLFDLARIVSATDNFSISNKLGEGGFGPVYKGTLDGGQEIAGEEKLLIYEYMPNKSLDSFIFDQTRKKLLNWSKRYHIICEIARGLLYLHQDSRLRIIHRDLKASNILLDNEMNSKISDFGLARILGEDQNTDITHRVAGTYGYMAPEYALDGNFSIKSDVFSFGILLLEIITGKKNRGNYHQRESINLIGYAWDLWIEGKLTELIDECLKDSCNYLAGGQDLYIRMPASELETEERRHKKLTVIVVTSVVPVTLVILLVCYYTHKARRKTTEESEGTDGGQADDLDLPLIDLSIIATATDNFSMSNKIGEGGFGPVYKGILHGQEIAVKRLSTLSGQGIIEFKNEVKLIAKLQHRNLVKLHGCCIQGQEKMLVYEYMPNSSLDSFIFDHTKDFGIARSCGGDQTEGSTNRIIGTYGYMAPEYVVHGLFSVKSDVFSFGILLLEIICGKKSKESYHTGHTLIGHAWISWKEGRASELIDPNIEENSCISSQDLYVRMPASELEAEQGRHKKLTVIVVISIVPVAGVILLVYYYTHKARRKTTEESEGTDGGQTGDLDLPLFDLSIIATATDNFSMSNKIGEGGFGPVYKGILHGQEIAVKRLSTHSWQGMIEFKNEVKLIAKLQHRNLVKIHGYCIQGQEKMLIYEFMPNSSLDSFIFDHAKDFGIARSCGADQTEGNTNRIIGTYGYMAPEYVVHGLFSVKSDVFSFGILLLEIICGKKSKEFYHAGHTLIGHAWISWKEGRALELIDPNIEEGSCIASQAWILGKKAGH 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00781 843 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 465 561 - -
Bva09g00781 843 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 289 463 - -
Bva09g00781 843 ProSiteProfiles Protein kinase domain profile. 20 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00781 843 ProSiteProfiles Protein kinase domain profile. 375 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00781 843 Gene3D Phosphorylase Kinase; domain 1 623 719 - -
Bva09g00781 843 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 289 463 - -
Bva09g00781 843 SMART serkin_6 645 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00781 843 SMART serkin_6 375 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00781 843 SMART serkin_6 87 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00781 843 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 561 734 - -
Bva09g00781 843 SUPERFAMILY Protein kinase-like (PK-like) 70 286 IPR011009 -
Bva09g00781 843 SUPERFAMILY Protein kinase-like (PK-like) 629 792 IPR011009 -
Bva09g00781 843 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 465 561 - -
Bva09g00781 843 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 735 830 - -
Bva09g00781 843 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 113 - -
Bva09g00781 843 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 112 287 - -
Bva09g00781 843 Gene3D Phosphorylase Kinase; domain 1 47 115 - -
Bva09g00781 843 Gene3D Phosphorylase Kinase; domain 1 335 449 - -
Bva09g00781 843 Gene3D Transferase(Phosphotransferase) domain 1 124 311 - -
Bva09g00781 843 Gene3D Transferase(Phosphotransferase) domain 1 720 838 - -
Bva09g00781 843 Gene3D Transferase(Phosphotransferase) domain 1 450 585 - -
Bva09g00781 843 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 561 734 - -
Bva09g00781 843 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 112 287 - -
Bva09g00781 843 Pfam Protein tyrosine and serine/threonine kinase 646 732 IPR001245 GO:0004672|GO:0006468
Bva09g00781 843 Pfam Protein tyrosine and serine/threonine kinase 735 793 IPR001245 GO:0004672|GO:0006468
Bva09g00781 843 Pfam Protein tyrosine and serine/threonine kinase 465 526 IPR001245 GO:0004672|GO:0006468
Bva09g00781 843 Pfam Protein tyrosine and serine/threonine kinase 376 462 IPR001245 GO:0004672|GO:0006468
Bva09g00781 843 Pfam Protein tyrosine and serine/threonine kinase 114 262 IPR001245 GO:0004672|GO:0006468
Bva09g00781 843 SUPERFAMILY Protein kinase-like (PK-like) 361 527 IPR011009 -
Bva09g00781 843 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 735 830 - -
Bva09g00781 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Bva09g00781 843 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 2 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00781 Bva-Chr9 4009988 4023151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00781 567 821 Receptor kinase-like Gene Family AT4G05200 41.720 2.86e-68 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva09g00781 PK_Tyr_Ser-Thr 3.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00781 - - ahf:112769120 377.867