Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00779 ATGGCAGATGATCAATTTCAGACGAGTGGGAACTGGTGGGATTCAGCTAGAAACGTAAGCGGGGCATCGCAATCGACTTCCTCTGCTCTCACTAACATGGGCAACTTTGCTTGGCAACAACAAGCTTCGGATATGGTGGACATGAAGCCAAGGTCTTCCATGGATTCCATGCCAGCCTCAGGTAGTTCCTCTGTGGTTTTCCATGATACCCAGAAGCTTCAAGCACCAGATTCTGCTAGTGCCACCGACCCCAACTTGCACATGATGGGTTTAGGCCTTTCTTCCCAACCCATGGATTGGAATCAAGCATCCTTGCTCCGAGGAGGCGACAAGGGTGGGGAGAGCAGTTTCCGTTCGATGCTACAGCAAGAGAATTTAAGTTCATCAAGCACTGATTTTCAGCAAGAAACTGGGATGGGATTGTCTCATCAATTTCAATGGAGGGAAAAGCTGTTTTCTCCAGAGTCTTCAACGAATGAATTTAAGCAAGTGGATTCTTCAGCTCTTTATGGAAACCCATCTATGTTACAAGGACTATTGGCTTCTGATCATAATCAACCACAACAAGCTTCATTTGATCAGAATCGAGCTATGAATTTTCCATACCCAGCAAGCTATGGATTGAACTCAAGTGAGTTAGTGCATTCATGGTCCAAAGTTCCTCAGTTTTTAAGAGCTTCACCTCCAAAACAGCCACCCCATAATCAATTGCATTTCACGAACAACGCTCCTTTCTGGAATGCATCAGAGCTAGCCATTAAAGATGTGAGATCTGGGCTTTTCCCATCATTGCAAACCCCATTTCCCACTCCAAATTTCGATGTACAATCAAAGAATATTTCTGAAATTAGGGAATCGGGCTCCGTGGTGAAGAAAAGTACCAGTGAACCAGCACCCAATAAAAGGCCTCGAAATGAAACCCCATCGGCTTTGCCACCTTTTAAGGTGAGAAAGGAGAAGATGGGAGACAGAATCACTGCACTCCAACAATTGGTTTCACCTTTCGGAAAGACTGATACTGCTTCAGTGCTCTCTGAAGCCATTGAATACATCAAATTCCTCCATGAACAAGTGACTGTTTTAAGCACCCCATATATGAAAAGTGGAGCTCCAATACAGCAGAATCAACAGAGTTCTGGTAAATCTAAGGAAGCTGAGGGTCCAAAACAAGATCTAAGAAGCCGCGGACTATGTTTGGTGCCGGTTTCGAGCACATTTCCAATGAATCATGAAACCACTGTAGATTTTTGGACACCAACGTTCGGAGGAACATTCGGATA 1280 0.4461 MADDQFQTSGNWWDSARNVSGASQSTSSALTNMGNFAWQQQASDMVDMKPRSSMDSMPASGSSSVVFHDTQKLQAPDSASATDPNLHMMGLGLSSQPMDWNQASLLRGGDKGGESSFRSMLQQENLSSSSTDFQQETGMGLSHQFQWREKLFSPESSTNEFKQVDSSALYGNPSMLQGLLASDHNQPQQASFDQNRAMNFPYPASYGLNSSELVHSWSKVPQFLRASPPKQPPHNQLHFTNNAPFWNASELAIKDVRSGLFPSLQTPFPTPNFDVQSKNISEIRESGSVVKKSTSEPAPNKRPRNETPSALPPFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQQNQQSSGKSKEAEGPKQDLRSRGLCLVPVSSTFPMNHETTVDFWTPTFGGTFG 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00779 426 MobiDBLite consensus disorder prediction 41 65 - -
Bva09g00779 426 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 169 414 - -
Bva09g00779 426 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 18 166 - -
Bva09g00779 426 Gene3D - 315 379 IPR036638 GO:0046983
Bva09g00779 426 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 305 354 IPR011598 GO:0046983
Bva09g00779 426 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 169 414 - -
Bva09g00779 426 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 18 166 - -
Bva09g00779 426 MobiDBLite consensus disorder prediction 370 393 - -
Bva09g00779 426 SMART finulus 316 360 IPR011598 GO:0046983
Bva09g00779 426 MobiDBLite consensus disorder prediction 1 28 - -
Bva09g00779 426 CDD bHLH_AtbHLH_like 311 362 IPR045239 -
Bva09g00779 426 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 315 371 IPR036638 GO:0046983
Bva09g00779 426 MobiDBLite consensus disorder prediction 284 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00779 Bva-Chr9 3997586 4000779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00779 237 425 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 62.312 5.49e-67 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00779 - - gmx:100778697 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00779 09 3997586 4000779 Bva09g00779 09 3997586 4000779 ECH