Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00770 ATGGCAATGAGAGCAGCAGTGGCGGCGCCTCGGGGTTTAAGGCGGCTGTTCTCAACCACTTCAACTTCGACACCGTCGTTTATTCCTCTGCCTACCAGCACCACAGCTCCTGCTCGAGAGACTGCCGAGCCCAACACTAACCTTTTCGTCTCTGGGCTTAGCAAGCGTACTACTTCAGAAGGGCTGAGGGAAGCTTTTGCCAAATTTGGTGAAGTAGTTCATGCTCGAGTGGTAACTGATAGAGCATCAGGTTACTCTAAAGGGTTTGGTTTTGTAAAGTATGCTGCTATAGAAGAAGCTGCAAAGGGCATTGAAGGCATGGATGGCAAGTTCCTGGATGGATGGGTTATATTTGCAGAGTACGCAAGACCAAGGCCACCACCCGGACAACCTCAAAATAATATGTCTCCTCCTACATACGtTAAATGCCCTGCATCGCCGCAGGCCATGGGTCATGGGCCTAAAGCTGGTGGATATGAGCACAGCCCAAAATA 494 0.502 MAMRAAVAAPRGLRRLFSTTSTSTPSFIPLPTSTTAPARETAEPNTNLFVSGLSKRTTSEGLREAFAKFGEVVHARVVTDRASGYSKGFGFVKYAAIEEAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPQNNMSPPTYVKCPASPQAMGHGPKAGGYEHSPK 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00770 164 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 46 124 IPR000504 GO:0003723
Bva09g00770 164 SMART rrm1_1 47 120 IPR000504 GO:0003723
Bva09g00770 164 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE 1 146 - -
Bva09g00770 164 SUPERFAMILY RNA-binding domain, RBD 33 137 IPR035979 GO:0003676
Bva09g00770 164 Gene3D - 20 134 IPR012677 -
Bva09g00770 164 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 48 114 IPR000504 GO:0003723
Bva09g00770 164 MobiDBLite consensus disorder prediction 124 164 - -
Bva09g00770 164 PANTHER TRANSFORMER-2-RELATED 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00770 Bva-Chr9 3922552 3924642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00770 47 141 Eukaryotic Initiation Factors Gene Family AT2G23350 36.735 4.74e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00770 - - zju:107431313 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00770 09 3922552 3924642 Bva09g00770 09 3922552 3924642 ECH