Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00765 ATGCCAACAGTGTGGTTCTCTCTGAAGAGATCTCTACACTGCAAATCAGCGCCATCAGATGTTCATGACCCAAAATCAAGGAAGCACTTGAGCACAATCTTGACTAAAAGTGCAGGGAGGTCTGGGTGTTCAAGGTCCATAGCAAATCTCAAAGATGTCATCCATGGAAGCAAGAGGCACCTGGAGAAGCCACCAAGTTGCAGTCCAAGATCTATAGGGAGCAGTGAGTTCCTCAACCCAATAACCCATGAAGTGATTCTAAGCAACTCAAGGTGTGAGCTGAAAATAACCGGTTTTGGAGGATTCCAAGAAGGGGTTGGCAGTGGTGTTGGCGGCGGCGGCGGTGGTAGTAGTGGTGGCTCAACATTTGTGGGTACTTTAAGGCCAGGGACACCTGGCCCTGGAGGGCACCCTACAATGCACTACTTTAACCCTTCTTTTAAGACATCATCAACTCCTTCAAggaaatctcctttccttctaTCAGATAAAGAAGGTGGTTCTGCTTTGCATGGTGCTGGATTTCATTCAAGCTATAGGGTCTCTCTTGATACAGATTCTAATGGGTCTTCCACAGTGACTTGCCACAAATGTGGAGAGCAATTCAAAAAATGGGAAGCTGCAGAAGCTCACCATCTCTCCAAGCATGCTGTTACTGAGCTTGTGGAAGGAGACTCGTCTAGGAAAATAGTGGAGATAATATGCAGAACAAGCTGGCTGAAGTCTGAAAACCACTGTGGCAGAATTGAGAGAGTTTTGAAGGTCCATAACATGCAAAAGACTCTAGCTAGATTCGAAGAGTACAGAGAAATGGTGAAAATAAAAGCCAGCAAACTCCCCAAGAAGCATCCTCGGTGCCTCGCCGATGGGAATGAGCTTCTAAGATTCTATGGCACAACTGTTTCTTGCCCTCTTGGTCTCAATGGCTCTTCCAATCTCTGCCTATCTGAAAAATGCTGTGTTTGTAGAATCATCAGAAATGGGTTTTCCACCAAAAAGGAGCTCAAGGGTGGCATTGGCGTTTTCACAACTTCCACGAGTGGAAGAGCTTTTGAATCTATAGAGATTTTTGAAGATGACCCATCAATAAGAAAAGCATTGATAGTCTGCAGAGTAATAGCAGGGAGGGTCCATAGGCCTCTGGAGAACATTCAAGAAATGGCAGGCCAAACTGGGTTTGATTCATTAGCTGGGAAAGTTGGTCTTTATTCGAATATTGAGGAGCTTTATTTGCTAAATCCCAGAGCTCTTCTTCCTTGTTTTGTGGTAATTTGCAAAACTTG 1283 0.4427 MPTVWFSLKRSLHCKSAPSDVHDPKSRKHLSTILTKSAGRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFGGFQEGVGSGVGGGGGGSSGGSTFVGTLRPGTPGPGGHPTMHYFNPSFKTSSTPSRKSPFLLSDKEGGSALHGAGFHSSYRVSLDTDSNGSSTVTCHKCGEQFKKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLPKKHPRCLADGNELLRFYGTTVSCPLGLNGSSNLCLSEKCCVCRIIRNGFSTKKELKGGIGVFTTSTSGRAFESIEIFEDDPSIRKALIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKT 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00765 427 MobiDBLite consensus disorder prediction 110 159 - -
Bva09g00765 427 SUPERFAMILY ADP-ribosylation 218 426 - -
Bva09g00765 427 PANTHER - 2 426 - -
Bva09g00765 427 Gene3D - 208 427 - -
Bva09g00765 427 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 426 - -
Bva09g00765 427 ProSitePatterns Zinc finger C2H2 type domain signature. 195 216 IPR013087 -
Bva09g00765 427 MobiDBLite consensus disorder prediction 143 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00765 Bva-Chr9 3896477 3899002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00765 1 426 C2H2 Transcription Factor Family AT5G54630 69.130 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva09g00765 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00765 - - gmx:100787790 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00765 09 3896477 3899002 Bva09g00765 09 3896477 3899002 ECH