Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00758 ATGGTTTCCCCGGAAAACACCAATTGGCTTTTCGAATATCCCTTGATTGAAGATATCTCTGTCCCAGATGGGAATTTCACTGTCCCCGCCTCAGGTTTCAACTGGCCGGCGCAGGCCTTGATTGGCTCTTCGAATGGCAGTGCTGAAATTGATGGTGCTTTGGGGGATTCTGATTGCCTTAAAGAGTCTGGTTCAAAGAAGAGGGGTAGATCTGATTCATGTGCTGCTTCTAGCTCGAAGGCATGTCGAGAGAAGTTGCGTAGGGATAGGTTGAATGACAAATTTCTTGAATTAGGCTCCATTTTGGAGCCTGGACGACCTCCCAAAACGGATAAGGCTGCCATTCTGATTGATGCTGTGCGAATGGTGACTCAGTTACGTGGTGAAGCCCAGAAGTTGAAAGACTCCAATATGAATCTTCAAGAGAAGATCAAAGAGTTAAAGGCAGAGAAGAATGAACTTCGTGATGAGAAACAGAGGCTCAAGTCGGAGAAAGAGAAGTTGGAGCAGCAACTGAAAGCAGTTAATGCACAACCTGGTTTCTTGCCTCCCCCTCCTGCAATTCCTGCTGCTTTCACTGCACAAGGCCAAGCTCCTGGCAGCAAGTTGGTGCCTTTTGTTGGTTATCCAGGAGTTGCCATGTGGCAGTTTATGCCCCCAGCTGCTGTGGATACCTCCCAGGACCATGTACTCCGTCCACCAGTTGCCTA 710 0.4845 MVSPENTNWLFEYPLIEDISVPDGNFTVPASGFNWPAQALIGSSNGSAEIDGALGDSDCLKESGSKKRGRSDSCAASSSKACREKLRRDRLNDKFLELGSILEPGRPPKTDKAAILIDAVRMVTQLRGEAQKLKDSNMNLQEKIKELKAEKNELRDEKQRLKSEKEKLEQQLKAVNAQPGFLPPPPAIPAAFTAQGQAPGSKLVPFVGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00758 236 CDD bHLH_AtILR3_like 80 155 - -
Bva09g00758 236 SMART finulus 81 132 IPR011598 GO:0046983
Bva09g00758 236 Coils Coil 123 178 - -
Bva09g00758 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Bva09g00758 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 145 IPR036638 GO:0046983
Bva09g00758 236 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
Bva09g00758 236 Gene3D - 78 154 IPR036638 GO:0046983
Bva09g00758 236 PANTHER BHLH TRANSCRIPTION FACTOR 1 236 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Bva09g00758 236 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00758 Bva-Chr9 3865536 3868640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00758 1 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 72.803 1.02e-121 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva09g00758 HLH 5.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00758 - - jre:108993453 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00758 09 3865536 3868640 Bva07g01868 07 16823888 16826482 BWGD
Bva09g00758 09 3865536 3868640 Bva09g00758 09 3865536 3868640 ECH