Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00743 ATGATATTTCCATGGAAGACAGCAGCACTGTTACTATTGGTGTTTGTTTGTTATTCGAGAGTTGAGGTTTGTTATGGACAAGACTACGACGACGAGAAGAAGGCGGCACCGCCTCCGAATCCGGCATTTGATATGTGCAGTGGCATCTTCTTGACCTACAGCTTCCAAGGGAGGGACAAAGAGTACCCTCACGTGAAGAACGTTTCGGCGCAAGCGTGGGCTTTTAAGGCCGAGGCTTCCGTTACGAATCAGGGCGACGAAGAGCTCAAGGGATGGAAGATGTACATTGGGTTCCAGCACAGGGAGATATTGGTGTCGGCAAGTGGTGCCGTCCCCATCGACGTGGAGGATTTCCCGGCGGCGGTCGGAAATGGGACAACTCTGGCAGGGAATCCCATGACGGATTTGAAGACTGCCATTGAAACTGCCAGTGATTACAATCAGATGCAAGTCAGGATTCAGCTGACTGGGACACAGTTCGGTCTCAAAACAGGAACCCCAATGCCCAAGACGATTAGGCTTGAAAATGATGGCTATAAATGCCCCGCCGCAAGACGTCGAGggACGGAAATGTATGTGTGCTGCAAGAAGGACCCCAAAGCCAAGGCAAAGAAGAATAAGAGCAAGTTCCTTCCTCGTACGTACGGAGATATCACCATAGCATATGACGTGCTTCAATCCTTCAAAACAAACTACATGGTCCAGGTGACGATTGACAACAATCATCCATTATCTCGTCTTGATCACTGGAATTTGACATGGGAATGGCAAAATGGGGAATTCATTAACTCCATTAGAGGAGCTTACTCTCACTTAAGGGATCCCTCTGAGTGCTTATATGGCCCTGCTGGGAAATACTACGCAGATTTCGATTTCTCCCAGGTTGCCAACTGTCAGAAAAAACCCGTCCTGTCTGATCTCCCTGCTGAGAGAAAAGAGGATGAAAAAGTTGGCAAACTCCCGTGGTGCTGCAGAAACGGCACCGTCTTGCCACCCATCATGGACAAGAACAAAGCAAGGTCACTTTTCCAGATGCAAGTATACAAGATGCCACCTTTATCAGATAACAGTACTGCTATCTCTCCCCCACTCAAATGGCACCTCGCTGGTGTTCTTCAACCAGAGTTCAAATGTGGACCCCCAATTAGAGTGGACCCACAAGAATTCCCAGACCCAAATGGCCTTCAAGCTATTTCCACTGCTGTTGCTAGTTGGCAGATTGTCTGCAACGTCACAAAACCCAAGCCTAAGGAAAACAAATGTTGTGTCTCATTTTCAGCCTTTTACGGCGACTCTGCCATTCCCTGCAACACTTGTGCTTGTGGCTGTGAAGAAACTAGGAAATGCGATCCCAACGCACGTCCAATGCTTATTCCCCCAGAAGCCCTTCTTGTTCCTTTCGTCAACCGAACCGCAAAGGCCAGAGCTTGGGCCAAAATCAAGCACATGCATATCCCCAAGAAATTGCCCTGTGGTGATAATTGCCCTGTTAGCATCAATTGGCATGTCAACACAGACCACAAAAATGGCTGGACTGCAAGAATCACTCTTTTCAATTGGGAGGATTTCACCTACGATGACTGGTTCACTGCCGTCTCATTCAAGAGGTCTTTTGAGAATTACGAAGCTGTGTATTCCTTCAATGGGACGAGAATCCCAAACCTCAAGACAATCTTCTTCCAAGGCTTTAAGGGCATGAATTACCTGGCTGGAGAAACAAATGGGACCCATCATTATGATCCAAAGGTTCCTGGGAAGCAGCAATCGGTGATTTCTTTCAATAAGAAGCGCATCAAAAACTTTGACATCAGACACGATGGCTTCCCCACAAAGGTTATCTTCAATGGCCAAGAGTGTGCTCTCCCTCCAAGAACACCTGCTCATGCTTCATCAGCACATCGCTCTTCTATCAATGTCCTTGCACTGATCTCCACAGGGTTGATCACTTTCTTGCTCATGAAGGAACCTTTTTACTG 1976 0.4752 MIFPWKTAALLLLVFVCYSRVEVCYGQDYDDEKKAAPPPNPAFDMCSGIFLTYSFQGRDKEYPHVKNVSAQAWAFKAEASVTNQGDEELKGWKMYIGFQHREILVSASGAVPIDVEDFPAAVGNGTTLAGNPMTDLKTAIETASDYNQMQVRIQLTGTQFGLKTGTPMPKTIRLENDGYKCPAARRRGTEMYVCCKKDPKAKAKKNKSKFLPRTYGDITIAYDVLQSFKTNYMVQVTIDNNHPLSRLDHWNLTWEWQNGEFINSIRGAYSHLRDPSECLYGPAGKYYADFDFSQVANCQKKPVLSDLPAERKEDEKVGKLPWCCRNGTVLPPIMDKNKARSLFQMQVYKMPPLSDNSTAISPPLKWHLAGVLQPEFKCGPPIRVDPQEFPDPNGLQAISTAVASWQIVCNVTKPKPKENKCCVSFSAFYGDSAIPCNTCACGCEETRKCDPNARPMLIPPEALLVPFVNRTAKARAWAKIKHMHIPKKLPCGDNCPVSINWHVNTDHKNGWTARITLFNWEDFTYDDWFTAVSFKRSFENYEAVYSFNGTRIPNLKTIFFQGFKGMNYLAGETNGTHHYDPKVPGKQQSVISFNKKRIKNFDIRHDGFPTKVIFNGQECALPPRTPAHASSAHRSSINVLALISTGLITFLLMKEPFY 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00743 658 Pfam COBRA-like protein 232 412 IPR006918 GO:0010215|GO:0031225
Bva09g00743 658 PANTHER COBRA-LIKE PROTEIN 7 4 656 - -
Bva09g00743 658 PANTHER COBRA-LIKE PROTEIN 10 4 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00743 Bva-Chr9 3798585 3801009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00743 1 655 COBRA Gene Family AT3G20580 58.383 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00743 - - gmx:100789175 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00743 09 3798585 3801009 Bva07g01884 07 16908782 16911297 ECH
Bva09g00743 09 3798585 3801009 Bva09g00743 09 3798585 3801009 ECH