Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00734 ATGATGTCAAGATCGTATACAAATCTTTTGGATTTGGCTTCTGGTAATTTCCCAGCCATGGTTGGTGGGTTTAAGGAGCGCAGGCGGTTACCAAGGGTTATGACCGTCCCTGGGAATATTGCTGAACTCGATGACGACCAGGCGTATAGTGTTTCTTCGGACAATCCATCAGCTGCTTCTTTAGATAGGATAATCATTGTAGCAAACTATCTTCCTTTGATAGCAAAGCGTAAAGAGGATGGTAAAGGATGGGATTTCACTTGGAACGAGGATGCATTGCTTAGACAACTTAAGGATGGATTTCCAGAAGATACGGAGGTTCTTTATGTTGGGTCACTGGGGGCTGAAATTGATTCATCTGAACAGGATGATGTATCACAACATTTACTGGATAAATTCAAATGTGTGCCTACTTTTCTTCCCCCTGATCTTTTGACTAAATATTACGATGGTTTCTGTAAGAGGCAGTTATGGCCCCTGTTTCATTACATGTTACCATTTTCAACTGATAAAAGCCACCGTTTTGATCGTTCTTTGTGGGAAGCATATGTGTCAGCAAATAAGCGATTTTTTCAGAAGGtagttgaaataataaatccaGAGGATGACTATATTTGGATTCATGATTACCATCTGATGGTGCTGCCAACCTTTATACGAAGGCGCTTTAACAGAGTTAAAATGGGATTTTTCCTGCATAGCCCTTTTCCATCGTCAGAGATATATCGGACTCTACCTGTCAGGGAAGAGATTCTTAAAGCTTTACTTAACTCTGATATCATTGGTTTCCACACATTTGATTATGCTCGTCATTTCCTTTCCTGTTGCAGTCGTATGTTGGGTCTGGAGTATCAGTCCAAGAGAGGCTACTTAGGATTGGAATATTATGGAAGGACTATCAGTATTAAGATTATGCCGGTTGGAGTTCATATGGGTCGGATACAATCAGTTATGAATATGACAGAGGAGGAGTGCAAGGCAAGGGAGCTCAAACAacaatttgaaggaaaaacaGTGTTGCTTGGTGTTGATGATATGGACATTTTTAAAGGTATTAATTTGAAGATTTTGGCTATGGAGCAGATGCTCAGACAACATCCTAAATGGGTAGGGAGAGCCATATTGATCCAGATAGTAAATCCTGCTAGGGGCAAGGGGATACATCTAGAGGAAATACGAGCTGAAATACAAGAAAGCTGCGGCAGGGTAAACAGAATATTTGGCAGGCCTGGATATGAAccaattgtttttattgataGATCTGTACCAATTACGGAAAAACTTGCCTATTACAGTATTGCTGAGTGTGTTGTTGTCACAGCAGTAAGGGATGGGATGAACCTAACGCCTTATGAATATATTGCTTGTAGACAGGGAATATCTATTTCTGAGTCATGTGCTGATGTTGGTGGCCCAAAGAAGAGCATGCTAGTAATATCAGAATTTATTGGGTGTTCTCCATCACTTAGTGGAGCTATCCGTGTCAATCCTTGGAATGTTGAAACAACAGCAGAGGCATTGAATGAAGCCATTTCTATGCTCGAGTCAGAGAAGCAAATGCGACATGAAAAGCATTATCGATATGTTAGCACTCATGATGTGGCTTATTGGTCACGTAGTTTCTTGCAAGATATGGAGAGGGCTTGCTTAGACCTTCTAAGGAAGAGATGTTGGGGAATAGGTCTTAGCTTTGGGTTTAGAGTTGTGGCACTTGATCCTAACTTTAGAAAGCTCTCAATCGATGCTATTATTTCATCTTACAAGAGGGCGAAGAGTAGGGCCATTTTGTTAGATTATGATGGCACTGTAATGCCACAGAACTCCATTAATAAGAGTCCAAGTCAGGAGGTCACCTTCATTTTAAACAAACTCTGTGCAGACTCCAACAATCAAGTTTTCATTGTTAGTGGAAGGGGGAGGGACAGCTTAAGCCAGTGGTTTACTCCCTGCCCAAAACTCGGAATCGCAGCAGAACATGGGTACTTCTTGAGATGGTCTCAAAGCAAAGAATGGGAAATTTGTGGTAAGAGCACTGACTTTGGGTGGATGCACATTGCTGAACCTGTTATGAAACTGTACACAGAGGCAACTGATGGTTCTGGCATTGAAACCAAGGAAAGTGCTTTGGTCTGGCAATACCGGGATGCAGACCCTGGATTTGGATCTTCCCAGGCTAAGGAAATGTTAGATCATCTAGAGAGTGTTTTGGCCAATGAACCTGTTGCTGTAAAGAGTGGTCAGTTCATTGTTGAAGTAAAGCCTCAGGATGTGAGCAAAGGATTAGTTGcagaaaagatattttcaacAATGGCCGAGAGTGGGAAACAGGCTGACTTTGTGCTGTGTGTTGGCGATGACAGATCAGATGAGGACATGTTTGAAATTATCAGTAGTGCAGTTTCAAGGAATATTCTTTCTGCCAATGGTTCGGTGTATGCTTGCACAGTTGGACAAAAACCCAGTAAAGCTAAGTATTATCTGGACGATACAACTGACGTAATAAACATGCTAGAATCATTGGCCGAAGTCTCTGAGGATGACCTTTG 2546 0.4089 MMSRSYTNLLDLASGNFPAMVGGFKERRRLPRVMTVPGNIAELDDDQAYSVSSDNPSAASLDRIIIVANYLPLIAKRKEDGKGWDFTWNEDALLRQLKDGFPEDTEVLYVGSLGAEIDSSEQDDVSQHLLDKFKCVPTFLPPDLLTKYYDGFCKRQLWPLFHYMLPFSTDKSHRFDRSLWEAYVSANKRFFQKVVEIINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGVHMGRIQSVMNMTEEECKARELKQQFEGKTVLLGVDDMDIFKGINLKILAMEQMLRQHPKWVGRAILIQIVNPARGKGIHLEEIRAEIQESCGRVNRIFGRPGYEPIVFIDRSVPITEKLAYYSIAECVVVTAVRDGMNLTPYEYIACRQGISISESCADVGGPKKSMLVISEFIGCSPSLSGAIRVNPWNVETTAEALNEAISMLESEKQMRHEKHYRYVSTHDVAYWSRSFLQDMERACLDLLRKRCWGIGLSFGFRVVALDPNFRKLSIDAIISSYKRAKSRAILLDYDGTVMPQNSINKSPSQEVTFILNKLCADSNNQVFIVSGRGRDSLSQWFTPCPKLGIAAEHGYFLRWSQSKEWEICGKSTDFGWMHIAEPVMKLYTEATDGSGIETKESALVWQYRDADPGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAEKIFSTMAESGKQADFVLCVGDDRSDEDMFEIISSAVSRNILSANGSVYACTVGQKPSKAKYYLDDTTDVINMLESLAEVSEDDL 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00734 848 SUPERFAMILY HAD-like 593 841 IPR036412 -
Bva09g00734 848 TIGRFAM T6PP: trehalose-phosphatase 590 841 IPR003337 GO:0003824|GO:0005992
Bva09g00734 848 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 595 799 IPR006379 -
Bva09g00734 848 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 62 549 - -
Bva09g00734 848 Pfam Trehalose-phosphatase 596 830 IPR003337 GO:0003824|GO:0005992
Bva09g00734 848 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 846 IPR001830 GO:0003824|GO:0005992
Bva09g00734 848 Gene3D Glycogen Phosphorylase B; 57 316 - -
Bva09g00734 848 Gene3D Glycogen Phosphorylase B; 317 530 - -
Bva09g00734 848 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED 1 846 - -
Bva09g00734 848 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Bva09g00734 848 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Bva09g00734 848 CDD HAD_TPP 594 835 - -
Bva09g00734 848 Gene3D - 721 847 IPR023214 -
Bva09g00734 848 Gene3D - 592 707 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00734 Bva-Chr9 3752872 3757882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00734 1 845 Trehalose Biosynthesis Gene Families AT1G06410 77.515 0.0 1375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00734 K16055 - gmx:100800847 1493.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00734 09 3752872 3757882 Bva09g00734 09 3752872 3757882 ECH