Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00719 ATGTCAGGAGTTGGGCCTCTTTCGCAGGATTGGGAACCGGTGGTGCTCCGTAAGAAAGCTCCCACCGCCGCTGCCAAGAAGGATGAGAAAGCCGTTAATGCCGCTCGCCGTTCCGGCGCTGAAATTGATACCGTCAAAAAACatAATGCTGGGACAAACAAAGCTGCTTCTAGTGGCACTTCATTGAACACAAAGAGGCTTGATGATGATTCAGAGAGCCTAGCTCATGACCGGGTACCAACTGAACTCAAAAAAGCAATTATGCAAGCTCGGATGGATAAGAAACTTACCCAGGCTCAGCTTGCTCAATTGATCAATGAGAAACCTCAAGTGATTCAGGAATACGAATCAGGAAAAGCCATTCCAAATCAGCAGATCATTAGCAAGTTGGAGAGAGCTCTTGGAGCCAAACTGCGTGGGAAGAAATA 428 0.4743 MSGVGPLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGAEIDTVKKHNAGTNKAASSGTSLNTKRLDDDSESLAHDRVPTELKKAIMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIISKLERALGAKLRGKK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00719 142 SMART mbf_short4 86 141 IPR001387 -
Bva09g00719 142 ProSiteProfiles Cro/C1-type HTH domain profile. 87 141 IPR001387 -
Bva09g00719 142 SUPERFAMILY lambda repressor-like DNA-binding domains 80 138 IPR010982 GO:0003677
Bva09g00719 142 CDD HTH_XRE 85 135 IPR001387 -
Bva09g00719 142 Gene3D - 71 142 IPR010982 GO:0003677
Bva09g00719 142 MobiDBLite consensus disorder prediction 21 48 - -
Bva09g00719 142 PANTHER MULTIPROTEIN BRIDGING FACTOR 1B 1 142 - -
Bva09g00719 142 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
Bva09g00719 142 Coils Coil 87 107 - -
Bva09g00719 142 Pfam Helix-turn-helix 87 137 IPR001387 -
Bva09g00719 142 MobiDBLite consensus disorder prediction 1 76 - -
Bva09g00719 142 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 1 142 - -
Bva09g00719 142 MobiDBLite consensus disorder prediction 50 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00719 Bva-Chr9 3693702 3696281 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Bva09g00719 MBF1 1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00719 K03627 - gmx:100499864 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00719 09 3693702 3696281 Bva09g00719 09 3693702 3696281 ECH