Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00716 ATGGCTGAGAGAATTTACATATCTGACGATGATAATAGCGACGGAAGCAATTCTCAAGCAAAGCCCTCTTCTCTGAGTCCTCGAAAACGTTCATTTTTTGACTTGAATGAAGAAGCCGTGGATGATGTTAATGATCATAGCATTAGTAACAACGACATATCATCTCCAGAAGGTAACTTGAGTAGCAATAACTCGAGCACAGAAGGGAAAGAGAGTACAAATACGGTTAGGCAATATGTACGGTCCAAAATGCCAAGGCTCCGTTGGACTCCTGATCTCCATCTAGCTTTTGTGCATGCTGTTGAGAGACTTGGTGGACAGGAAAGAGCAACACCCAAGTTGGTTCTCCAGTTAATGAATGTGAAAGGACTCAGCATTGCACATGTCAAAAGCCATTTGCAGATGTACAGAAGTAAAAAGCTTGATGAGTCTGGCCAAGtTTTATCACACACAAATAGAGCGATAATGCAAGGGAGAGATCACATTTTTGAGATGTACGGAAGATACAATGGTCAAGTGCAGTTTGGATTTGATAATGGGAATTTTCTGCCATCTTCTATTCTAATGAAGCAGCAGTATGACTTCAACGCTCATGGTCCTTCAAGATTTCAGCCAGCAAGTATTTTCAATAGTAGCTTGACAAGACCAAATTCAATGGGAAGCAAAGGCGATTGGGGGCTTGACAAGTTTCCTAATGATACAAGAATCTTCCAAAAGGGGAATATGATGACAATCTCACACATATTTGATGTGCAGGAAGCCATAACAAAGTATGGACCTCTAAGACCTAGCCAATTTcttgaagaaaagaagtggCCTTCTCGGCAAGGAGCTGGAGCACAAGGATATCAAAAACAAGAATCTCTTAGCTTCTCTTGGGATGACAAGTATACTTCACAACCTTCCCTAATGAGAAACAAAGGGAACTCAATCAGTAATCAATATCAAGGAAGTTCCCGTAACCCAATCTTCTCTGGCCAGTTACGGTTTGATGCTGACGAGGTTCATGATCTACAAGATGGACAGCTGCAGCTCAGAAAAGAGGATCAGATATCACAAGCTGGACAGGTAAAAGACAAGTTAGAGAGGTTGAAGGAGAATAAAGGGTCACCAAGTTTCTTAGAGCTAAGCTTGAGTAAGGATTGTGGAAATGTTGGACAAGAGAGTACTGAAAGAGAAATCAACACGATGCTCTCTCTTTCACTATTCTCAGCTGCCTCTTCATCAATGCAACAAGCAAAGTGTAGTGAAAAACATAAAGATATTACTCATATCGAGAGTTTGCGTTTACAAAATTGCATCAAGGGATCCTTTGGGGTGAGTACTTA 1328 0.4051 MAERIYISDDDNSDGSNSQAKPSSLSPRKRSFFDLNEEAVDDVNDHSISNNDISSPEGNLSSNNSSTEGKESTNTVRQYVRSKMPRLRWTPDLHLAFVHAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRSKKLDESGQVLSHTNRAIMQGRDHIFEMYGRYNGQVQFGFDNGNFLPSSILMKQQYDFNAHGPSRFQPASIFNSSLTRPNSMGSKGDWGLDKFPNDTRIFQKGNMMTISHIFDVQEAITKYGPLRPSQFLEEKKWPSRQGAGAQGYQKQESLSFSWDDKYTSQPSLMRNKGNSISNQYQGSSRNPIFSGQLRFDADEVHDLQDGQLQLRKEDQISQAGQVKDKLERLKENKGSPSFLELSLSKDCGNVGQESTEREINTMLSLSLFSAASSSMQQAKCSEKHKDITHIESLRLQNCIKGSFGVST 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00716 442 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 24 420 IPR044848 GO:0003700
Bva09g00716 442 Coils Coil 347 367 - -
Bva09g00716 442 MobiDBLite consensus disorder prediction 11 30 - -
Bva09g00716 442 MobiDBLite consensus disorder prediction 31 45 - -
Bva09g00716 442 Pfam Myb-like DNA-binding domain 87 137 IPR001005 -
Bva09g00716 442 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 85 140 IPR006447 GO:0003677
Bva09g00716 442 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 141 IPR017930 -
Bva09g00716 442 MobiDBLite consensus disorder prediction 1 76 - -
Bva09g00716 442 Gene3D - 84 141 - -
Bva09g00716 442 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 24 420 - -
Bva09g00716 442 MobiDBLite consensus disorder prediction 46 76 - -
Bva09g00716 442 SUPERFAMILY Homeodomain-like 83 139 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00716 Bva-Chr9 3678117 3680205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00716 73 215 G2-like Transcription Factor Family AT2G42660 51.701 2.01e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva09g00716 Myb_DNA-binding 7.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00716 - - lang:109337615 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00716 09 3678117 3680205 Bva09g00716 09 3678117 3680205 ECH