Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00706 ATGGCTAGTAGTACTGCATCCATGACCATGACCATGACCATGAAAGACTGCTTTGAGAAAAACGACATCGTGGAGGTGTGCGGGCGAGACGGGTTTCCGGGGTCTTACTATGTAGCAAAAATAATCTTCCCCAAGTACCATAACTACTACGTCGTCGCGTTCAAGAACGTGTTGAAGGATGACGGATCTGGGCCTCTAACAACGGTGGCGTGCCCGGAGGAACTCCGTCCTCTGCCTCCAAGGGTTCCAATACCGCCGACTGGGTTTGATATCGATGACAAAGTGGATGCATTCGACAATGGTGGCTGGTGGGTCGGCGTAGTCACCAAAAAAAGTGGCACCACCTACCTCGTATATTTTGAACATTACAGCAGAGAGGCTATTTACCCTATATCCAGTCTTAGGGTTCACCAAGAATTTGTCAACGGCCAATGGGTTTA 440 0.4932 MASSTASMTMTMTMKDCFEKNDIVEVCGRDGFPGSYYVAKIIFPKYHNYYVVAFKNVLKDDGSGPLTTVACPEELRPLPPRVPIPPTGFDIDDKVDAFDNGGWWVGVVTKKSGTTYLVYFEHYSREAIYPISSLRVHQEFVNGQWV 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00706 146 Pfam Agenet domain 22 80 IPR008395 -
Bva09g00706 146 SMART agenet_At_2 87 142 IPR014002 -
Bva09g00706 146 SMART agenet_At_2 16 83 IPR014002 -
Bva09g00706 146 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 13 145 - -
Bva09g00706 146 PANTHER - 13 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00706 Bva-Chr9 3600637 3601077 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00706 30 140 PHD Transcription Factor Family AT5G58610 25.191 1.40e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00706 - - ccav:112521360 124.405