Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00689 ATGGGCATGAAGAGCACTGGAGGAGAGATTGTTCAGGTCCAAGGAGGCCACATTGTTCGATCCACAGGTAGAAAAGATCGTCACAGCAAGGTTTACACAGCAAAAGGTCCTCGTGATCGCAGGGTGAGACTCTCTGCTCACACAGCCATTCAATTCTACGATGTTCAAGACCGTCTCGGCTTTGACCGACCAAGCAAGGCCGTGGATTGGCTCATAAACAAGGCAAAGTCTGCCATTGACAGGCTTGCTGAGCTTCCTCCATGGCATCCACCTGGCACTAATATCGCAGCAGCAGAAGAGACAGAGCAGAATGCAGGCTCAAGTGAAATGGCAATCGCAGAGCAATCAGAGTCTTCTGACTACAATTTTCAGCTCCAAAGGCAATTAGATGAGAACCCAGATAACCATTCACCCTTTATTCATCAACAGATTGATTCAGACGCCATAGCTTTCTTTCCCACAACCTCTGCGAATTCCTCCATCAATTTTCAGAGCTACCCATCTGATATGATCTCCAGAAACACCAATTCCACTGAAGATCTTGGCCTATCTCTTCATTCTTTTCAAGACCCAGGTTTAATTCATGGCCAATCACATGAGGGCCAGAATCAAACACCttcaaatggacaaactttctTTGGTGGCTCAAACCCTGTTGGATTTGAGACCAATTACCAGAGAATGGTGACTTGGAACAGCGAAAGCAGCACGGATATCAACAGAGGTGGGTTCATGATTAACAATTCGCCGCCATTGCTAGGCCAAGGCTCAACTTTTCCTCAGAGGGGGACCCTTCAGTCCAGTTTTTCACAATCACTTCGTGCTTGGAATGACATTCCAATGAATTCGTCGGAGCATCACAAGCCACAAACAGTTCACGAAGCTTCCATCTTCGGTACCCGGTTTCTTTCAACTGGGTTACCCGGGTTCAGTATTCCGGCAAGGTTTCCAGAAGTGGAACAGGGCCATGGGGTCGCTCCCGATAAGCTACCCTCTGGTTCTCCTAATAGTCACCACTA 1019 0.4701 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLINKAKSAIDRLAELPPWHPPGTNIAAAEETEQNAGSSEMAIAEQSESSDYNFQLQRQLDENPDNHSPFIHQQIDSDAIAFFPTTSANSSINFQSYPSDMISRNTNSTEDLGLSLHSFQDPGLIHGQSHEGQNQTPSNGQTFFGGSNPVGFETNYQRMVTWNSESSTDINRGGFMINNSPPLLGQGSTFPQRGTLQSSFSQSLRAWNDIPMNSSEHHKPQTVHEASIFGTRFLSTGLPGFSIPARFPEVEQGHGVAPDKLPSGSPNSHH 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00689 339 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Bva09g00689 339 MobiDBLite consensus disorder prediction 196 217 - -
Bva09g00689 339 PANTHER TRANSCRIPTION FACTOR TCP4 2 339 - -
Bva09g00689 339 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 339 IPR005333 GO:0003700
Bva09g00689 339 Pfam TCP family transcription factor 23 128 IPR017887 -
Bva09g00689 339 MobiDBLite consensus disorder prediction 192 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00689 Bva-Chr9 3520801 3522848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00689 8 325 TCP Transcription Factor Family AT3G15030 43.896 2.43e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva09g00689 TCP 1.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00689 - - gmx:100814907 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00689 09 3520801 3522848 Bva09g00910 09 4691278 4693117 ECH
Bva09g00689 09 3520801 3522848 Bva07g01686 07 15880374 15883622 ECH
Bva09g00689 09 3520801 3522848 Bva09g00689 09 3520801 3522848 ECH