Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00673 ATGGAACTCCTCAAAGAAGAGCATGCTTCCAGACTACTCAAAGCTCAAACCCACATCTGGAATCACATTTTCAGCTTCATAAACTCCATGTCCCTCAAATGTGCTATTGACTTAAACATACCAGATATCATCCACAACCATGGTAAACCCATGCCACTCTCTGAGCTCATTTCTGCTCTACCAACCCACCCATCAAAAACCCGTTGCATCTACCGCTTGATGCGCATTTTGATCCATTCTGGCTTCTTTGCTCTTGCGAAAATTGCTGATGAGAATGATCAGCTAGAAGAGGGGTATGTTCTAACTGATGCTTCCACCCTTCTGCTTAAAGACAACCCCTTGAGTGTGGCACCTTTCTTGCTTGCCATGCTTGATCCTATTTTGACAAAGCCATGGTATGAGTTGGCTATTTGGTTCCAAAATGAAGATCCCACCCCATTTGACACAGCACATGGGATGACATTTTGGGAATATGCTGGCAATGAGCCAAGGCTTAATCATTTTTTCAATGATGCCATGGCAAGTGATGCTAGATTGGTTACTAGTGTGGTGATTGAAAAGTGTAAGGGGGTCTTCAAGGGCTTGGAGTCATTAATTGATGTTGGGGGTGGCACAGGGACAGTGGCAAAGTCCATTGCCAAAGCATTCCCACAAATTGAATGCACTGTATTTGATCTCCCTCATGTTGTTGAAGGCTTGCAAGGGAGTGGGAATCTCAAATATGTTGGAGGGGACATGTTTGAGGCAATTCCTCCAGCAGATGCTATATTGTTAAAGTGGATATTGCATGATTGGAACGATGAAGAGTGtatcaaaatattgaagaaatgCAGGGAGGCACTTGTAAGCAAAAACACAAAAGGGAAGGTGATCATCATAGACATGATGATGGAAAATGAGAAAGGGGACGATGAATCAGTTGAAACACAACTATTCTTTGATATGCTGATGATGGTGCTGGTTactggaaaagaaagaaacgagAAAGAGTGGGCCAAGTTGATTTTCTCTGCTGGTTTCAGTGACTATAAGATAACTCCAGTTCTGGGTTTAAGGTCTCTCATTGAGGCTTATCCTTA 1079 0.4161 MELLKEEHASRLLKAQTHIWNHIFSFINSMSLKCAIDLNIPDIIHNHGKPMPLSELISALPTHPSKTRCIYRLMRILIHSGFFALAKIADENDQLEEGYVLTDASTLLLKDNPLSVAPFLLAMLDPILTKPWYELAIWFQNEDPTPFDTAHGMTFWEYAGNEPRLNHFFNDAMASDARLVTSVVIEKCKGVFKGLESLIDVGGGTGTVAKSIAKAFPQIECTVFDLPHVVEGLQGSGNLKYVGGDMFEAIPPADAILLKWILHDWNDEECIKILKKCREALVSKNTKGKVIIIDMMMENEKGDDESVETQLFFDMLMMVLVTGKERNEKEWAKLIFSAGFSDYKITPVLGLRSLIEAYP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00673 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Bva09g00673 359 CDD AdoMet_MTases 198 293 - -
Bva09g00673 359 Pfam O-methyltransferase domain 132 341 IPR001077 GO:0008171
Bva09g00673 359 Gene3D Vaccinia Virus protein VP39 109 359 IPR029063 -
Bva09g00673 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 358 IPR029063 -
Bva09g00673 359 Gene3D - 2 108 IPR036388 -
Bva09g00673 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 359 IPR016461 GO:0008168
Bva09g00673 359 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Bva09g00673 359 PANTHER O-METHYLTRANSFERASE 7 359 IPR016461 GO:0008168
Bva09g00673 359 SUPERFAMILY "Winged helix" DNA-binding domain 9 113 IPR036390 -
Bva09g00673 359 PANTHER O-METHYLTRANSFERASE 7 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00673 Bva-Chr9 3476006 3477575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00673 30 345 Monolignol Biosynthesis Gene Families AT5G54160 35.826 1.53e-61 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00673 - K16040 gmx:100807238 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00673 09 3476006 3477575 Bva09g00673 09 3476006 3477575 ECH