Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00672 ATGGACGACGAGTTACCATTTGCGTGCTTCATTTGTAGGAAGCTTTTTGTTGATCCTGTTGTAACCAAGTGCAAGCACTACTTCTGTGAGCATTGTGCATTGAAGCATCATGCCAAGAACAAGAAGTGTTTTGTGTGTAACCAACCAACTCTCGGCATTTTTAATACAGCTCAAGAGATACTCAAGAAGATGGCTGCAGAGAATAAATA 209 0.4067 MDDELPFACFICRKLFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNTAQEILKKMAAENK 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00672 69 PANTHER ZINC FINGER PROTEIN 183 2 67 IPR039971 -
Bva09g00672 69 SMART ring_2 9 46 IPR001841 -
Bva09g00672 69 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 7 66 IPR013083 -
Bva09g00672 69 ProSiteProfiles Zinc finger RING-type profile. 9 47 IPR001841 -
Bva09g00672 69 SUPERFAMILY RING/U-box 7 50 - -
Bva09g00672 69 ProSitePatterns Zinc finger RING-type signature. 24 33 IPR017907 -
Bva09g00672 69 CDD RING-HC_RNF113A_B 7 47 - -
Bva09g00672 69 Pfam Zinc finger, C3HC4 type (RING finger) 8 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00672 Bva-Chr9 3472200 3472556 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00672 3 67 C2H2 Transcription Factor Family AT1G01350 83.077 5.44e-36 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00672 K13127 - zju:107423629 138.272