Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00664 ATGCTGGAAAAAATGGATGATGGAGAAATCTCAAGTGGTTTTCCTCATAACCCAACTGCTACGTCTGATAATCCGCCTATTCttaagaggaagagaaatctCCCAGGAAACCCAGATCCTGATGCAGAAGTCATAGCCTTATCTCCAAAGACTCTCATGGCCACAAACAGATTCTTGTGTGAAATTTGCGGGAAGGGTTTCCAGAGGGATCAAAATCTTCAACTCCATAGACGTGGACATAATCTTCCATGGAAACTTAAGCAGAGGACAAGCAAAGAAGTGAGGAAGCGCGTCTATGTCTGCCCTGAAAAGTCCTGCGTTCATAACCACCCTTCAAGGGCTCTGGGAGACTTAACTGGGATAAAGAAGCATTTTTGCAGAAAGCACGGTGAGAAGAAGTGGAAGTGCGAGAAGTGCTCAAAGCGATATGCCGTGCAGTCAGATTGGAAAGCGCACTCAAAAACCTGTGGCACCAGGGAATACAAATGTGACTGTGGCACTATCTTTTCAAGGAGGGATAGCTTCATAACTCATAGGGCCTTCTGTGATGCCTTGGCAGAAGAAACAGCTAGAGTTAGTGCAGCATCCAATCTGAATAGCTCATTAGGGGGCAATATCGGCTACAACATCATGGGAACTTCTCTAGGGCCTAACATGGCAaaccatttttcttcaattttcaagcCAATTTCAAGCAATGATGAAACAAGTAACCAAACATCAAGGGGGCTATCCCTATGGATGGGTCAAGGGTCTCAATCTCATGAGACAATGGGTAATGCTAGTAATAATCTTAATGAGATTCACCAGCTTGGGTCAACCACAAACTTATCATGTTCAATATATGGAAACCCACTTGTTTCATGTTCAAATCCTCCACCCTCTAATTATAATCTAAGTTGGGCCTTTGGAAATAAGCTTTCTTCAAATTCTAGTCAAGAGCTAACAAGCACTTCACTGCCATTGAGCGATGTTGTTAAGGATGCTGGAACTCATCAGCTTCTAAGTGTTCCTTCCTTGTACAGCTCCCAACACCAAGCGCATCAAACATCCTCAGCCAACATGTCAGCTACTGCTTTGTTACAAAAAGCTGCTCAAATTGGGGCAACCTCAACTGACCCATCATTCCTTGGGAGCTTAGGGTTGAAATGCAGTAACAGTCCAGATGAGAACAAGTTTTGTGGGCTGTGCGGTTCAGCTGGTTCAGTACTAACTAGTCTTGGAAGTGAGACAGAAAACTCATCTTCAGGTGAATTGTCACAAATGCACCCTGCAAAACGCCGCCACGTGCAGACCGAAGAGAGTGCAGCAGGAGGGCAAACTAGGGATTTTCTCGGCGTTGGTGTGCAAACCATTTGCCACCCTTCATCAATTAATGGttggatttg 1388 0.4337 MLEKMDDGEISSGFPHNPTATSDNPPILKRKRNLPGNPDPDAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVSAASNLNSSLGGNIGYNIMGTSLGPNMANHFSSIFKPISSNDETSNQTSRGLSLWMGQGSQSHETMGNASNNLNEIHQLGSTTNLSCSIYGNPLVSCSNPPPSNYNLSWAFGNKLSSNSSQELTSTSLPLSDVVKDAGTHQLLSVPSLYSSQHQAHQTSSANMSATALLQKAAQIGATSTDPSFLGSLGLKCSNSPDENKFCGLCGSAGSVLTSLGSETENSSSGELSQMHPAKRRHVQTEESAAGGQTRDFLGVGVQTICHPSSINGWI 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00664 462 MobiDBLite consensus disorder prediction 407 441 - -
Bva09g00664 462 Gene3D Classic Zinc Finger 92 182 - -
Bva09g00664 462 Gene3D Classic Zinc Finger 54 81 - -
Bva09g00664 462 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 5 459 - -
Bva09g00664 462 MobiDBLite consensus disorder prediction 407 421 - -
Bva09g00664 462 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Bva09g00664 462 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 80 IPR013087 -
Bva09g00664 462 MobiDBLite consensus disorder prediction 1 42 - -
Bva09g00664 462 SUPERFAMILY beta-beta-alpha zinc fingers 57 154 IPR036236 -
Bva09g00664 462 PANTHER F-BOX ASSOCIATED PROTEIN 5 459 - -
Bva09g00664 462 SMART c2h2final6 58 80 IPR013087 -
Bva09g00664 462 SMART c2h2final6 99 129 IPR013087 -
Bva09g00664 462 SMART c2h2final6 134 154 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00664 Bva-Chr9 3439144 3441990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00664 24 462 IDZ Gene Family AT1G03840 53.908 2.58e-153 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva09g00664 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00664 K25870 - qsu:112011855 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00664 09 3439144 3441990 Bva09g00664 09 3439144 3441990 ECH