Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00662 ATGACTCAGTGCAATGACCCTGATAACAACAATCATAGCATCATTAATGTGGAGACACGCAAAGACAGCTTAATTAGAACATGTCCTTCATGTGGTCATCATGTCAAATCTCAAGACCAGGCTGGAATCAATGATTTACCTGGATTGCCTGCTGGGGTGAAGTTTGATCCTACGGATCAGGAGCTTCTCGAACATTTGGAGGCGAAGGTGAGGTCTGATATTCATAAGCTTCACCCCTTGATTGACGAATTCATCCCTACCCTTGAAGGAGAGAATGGAATCTGCTATACTCATCCAGAGAAGTTGCCAGGAGTTAGGAAAGATGGTTTAATCCGCCATTTCTTTCACAGGCCTTCCAAAGCATACACCACCGGGACTaggaaaaggagaaaggtACACAGTGATGAAGACGGTAGCGAGACGCGGTGGCACAAAACAGGTAAGACTAGGCCAGTCTATATCAGTGGAAAGTTGAAAGGATTCAAGAAAATTCTTGTGCTGTACACCAACTACGGGAAGCAAAGAAAGCCAGAGAAAACAAACTGGGTTATGCATCAGTACCACCTGGGCAATTAtgaagaggagaaagaaggaGAATTAGTGGTTTCCAAGGTTTTCTATCAAACACAACCTAGACAATGTGGTTCACTGATGAAAGAGTCTGTTCCTGCCAAGCTAAAGGGTCAAGGAGCGCATGAGGTTACAAACCATAAAAGCAATAATGGGTTCATTGAGTACTATAATTCTTCCTTCATATCCTTTGATCAAGGTGGCCAACATAGAGCTGGTGCTCCTCAAGTAATTTCCCATTTTCCTGTCCATGATGGACCCTTCATTCCTTG 842 0.4192 MTQCNDPDNNNHSIINVETRKDSLIRTCPSCGHHVKSQDQAGINDLPGLPAGVKFDPTDQELLEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVRKDGLIRHFFHRPSKAYTTGTRKRRKVHSDEDGSETRWHKTGKTRPVYISGKLKGFKKILVLYTNYGKQRKPEKTNWVMHQYHLGNYEEEKEGELVVSKVFYQTQPRQCGSLMKESVPAKLKGQGAHEVTNHKSNNGFIEYYNSSFISFDQGGQHRAGAPQVISHFPVHDGPFIP 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00662 280 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 276 - -
Bva09g00662 280 Gene3D NAC domain 58 212 IPR036093 GO:0003677|GO:0006355
Bva09g00662 280 SUPERFAMILY NAC domain 45 208 IPR036093 GO:0003677|GO:0006355
Bva09g00662 280 MobiDBLite consensus disorder prediction 128 144 - -
Bva09g00662 280 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 276 IPR044799 GO:0003700
Bva09g00662 280 ProSiteProfiles NAC domain profile. 49 208 IPR003441 GO:0003677|GO:0006355
Bva09g00662 280 MobiDBLite consensus disorder prediction 123 144 - -
Bva09g00662 280 Pfam No apical meristem (NAM) protein 50 189 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00662 Bva-Chr9 3432754 3434841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00662 1 225 NAC Transcription Factor Family AT4G28500 71.610 2.39e-119 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva09g00662 NAM 1.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00662 - - gmx:100791648 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00662 09 3432754 3434841 Bva09g00662 09 3432754 3434841 ECH