Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00658 ATGGAGGCTGGTTCAgaaggagagaagaaaaagccGCCTGAGGGAGAGAACAAGACCAAGCGCAAAATGAAGACTGCTTCACAGCTGGAGGTTCTGGAGAAAACATATTCTGTGGAGCCTTATCCTTCAGAGTCTTTGCGAGCTGAGCTATCAGCGGAACTGGGACTTTCCGATCGTCAACTGCAGATGTGGTTTTGTCATCGTAGATTAAAGGACAGAAAGGCTTCGGCGCAGAAGAAACCGCGAAGTGATTTGACACTTGGAACGGTTATTTCAACGCCAGTCGGTGGGAGTGCTGAGCAAACGATGATGGATGATATAACGTACGAGGGTGCTTCGGTTTCTGGGTTGAGGCCATTATGCTCTCTGGACTCATGGCAAGTTGTGCCACGACCTGGTATGGCCTTTCCTAGGATTGGAGGTGGGTTGCCAGCAATGGATTACTACGAATCACAACAGTGCATAGCTGAGCTGCGAGCTATTGCATTTGTGGAAGCACAGTTAGGGGAGCCAATAAGAGAGGACGGGCCAATTCTGGGGATGGAATTTGATCCTTTGCCACCTGATGCATTTGGTGCTCCCATAGGTTCTGCGACAATGGGGCAGCATGGGCAATCTGGAAGGCCTTTTGAGGCAAAAATTTATGAACGACAGGATAAGGGTGTTTCAAGGACTCTCCATGAATATCAATTTATCCCAGAGAAGCCAACTGTTAGAAATGAGGCACACGAGAGAGTTGCACCTTCTCACCACTACAATTCCCTTGAAGCTATTCCACATTCCAGGACTTCAATACTATCTAGTGGGCGGTCATTCTATAATGGGAATGAAACTGCAACCTATGGATATGGATTTCAAGGTCAGATACCCAGGTTAAATCTCTTGTCTGAGCAAGGCCGGCAGAATCATGTGTTGCCTTCTGCTTCAGGAGAGAATGTTGATGTTCCTCAAAAGAATCTATTGGTTGATGTGGCAGTCGACACTCATATTGGGGCTTACCCAATAACTCAAATTGACAATTCTTTGATGCCGTCTGATTGGAGGGTTATCCATGGAGAGGAACTTACACGGTTGCAGAGGAAGCATAAGAATGAAGAGGCTAGAATGCAACGGGAAATTGAAGTACAAGAGAAGAGAATCAGAAAAGAGCTTGAAAAACAGGATATTTTAAAACGAAAGAGAGAAGAGCAAGTAAGGAAAGAGATGGAGAGGCAGGACCGTGAAAGGCGGAAGGAAGAGGAAAGGCTATTGCGTGAAAGACAACGAGAGGAGGAGAGATGCCAAAGAGAACAGCGGCGTGAACTAGAGCGGAGGGAGAAGTTTTTGCAAAAGGAGTCAATCAGAGCTGAGAAAATGAGGCAGAAGGAAGAACTACGCAGGGTAAAAGAGGCAGCAAGGATCAAAACTGCCAATGAGAGAGCTGTTGCCCGGAGAATGGCCAAAGAATCAATGGAACTAATTGAAGATGAACGCCTTGAACTAATGGAGTTGACTGCATCAAAGAAGGGGCTTTCTTCAATATTGTCCCTTGACCATGAAACTCTGCATAATCTTGAATTATATAGAGATGGGCAGGCTTCATTCCCACCTAAGTCTGTACGGTTGAAAAGACCTTTTTCAATTCAACCTTGGTCAGATTCTGAGGAGAACGTAGGGAATCTGCTAATGGTTTGGAGGTTCTTGATTACATTTATAGATGTGCTTGGAATGTGGCCATTTACCTTGGATGAGTTCATACAAGCTTTTCATGATTACGATCCAAGGTTGTTATCTGAGATTCATATTGCTCTTCTGAAAACcattataaaagatattgaagaTGTTGCCAGAACACCTTTTACCGGAGTTGGAACTAATCAAAATAGTGCTGCCAACTCTGGTGGGGGGCATCTGCAAGTAATTGAAGGGGCATATGTGTGGGGTTTTGATATAAGAAATTGGCAGCGACATTTAAACCTATTAACATGGCCAGAGATTTTGCGGCAATTTGCTTTATCAGCAGGATTTGGACCAcaattgaagaaaaggaatattGAGCGGGGGTATCCTTGTGATAATAATGAGGGTAATGATTTTGAAGATATAATTTCTAATCTACGCACTGGAGTAGCAGTAGAAAATGCTGTAGCTATTATGCAAGAAAGGGGACTATATAACCAAAGAAGATCAAGGCATTGCTTGACACCGGGAACTGTTAAATTTGCGGCATTTCATGTTCTTTCTCTTGAAGGAAGCAATGGCCTCACTATATTAGAAGTTGCAGAAAAGATTCAGAAATCTGGACTTCGTGATCTTACAACCAGCAAGACACCAGAGGCTTCCATAGCTGCTGCTTTGTCAAGGGATTCTAAGCTATTTGAAAGAACAGCACCTTCAACATATTGTGTACGCCCTGCCTATAGAAAGGATCCGGCCAATGCTGATTCAATTCTCTCAGCTGCCAGGGAAAGAATCAGGATATTCAAAAGTGGGTCCTTGGACACAGAAGAGCCAGATGATGGTGAAAGGGATGAAGATTCTGAAAGTGATGTGGCAGAAGATAATGAGGTTGAAGATTTAGCTATGGGAACAAATACTAAGAAAGAGCCTCTGAACTCTGAGGAATTTAATGAAAGGAATGCATTGAGAAGTAGAAAGGACGGTGGTGAGGTTTTGCGTAATCCTGATGATGGCTATGAGAAGGTGAGCAAGGGCATAACTTCAGTCCCTGCTGAAGACTTAAATGCAATTAAAGATACTGGGGAGTCTGTTGACCCATCTAGTGAAATTGCTGCTGGCAGCAATGATGTGGCTAATTCTGATGTTGAAGATGCCAATATTGATGAAAGCAACCTGGGTGAACCATGGGTTCTAGTGCTTATGGAGGGAGAGTATTCGGATCTTAGTGTCGAGGAGCGCCTTAATGCTCTTGTTGCCTTAATTGGTGTGACGATTGAAGGAAATTCAATCCGTGTTGCACTTGAgGAACGTCTGGAAGCAGCAAATGCTTTAAAGAAGCAGATGTGGTCTGAGGCACAGCTCGATAAACGCCGTCTCAAAGATGATTGCTTTGTTAAGATTCAGTCTGCCCCTAATACAGGCAATAAAAATGAACCAACTGTTTCAGTTCTGTCAACAGAGGGTAAGCATAGCCCATTGCTTACTgccaatgaaaaaaatgacGAGGCAATCCCAACTTCCCTTGACCAGCTAGAACAGACAATTGATTTACAGAATAATCAGAACCATCTTCAGAGTTTTCATTCAGAAATAAACACTCAAATACAAGATTTCTTTGCTCTTCCAGATAATTATTCCTTCCAACAATCCGGGTATATTGCTGAAAAAGCAAGGTCAAACTTAAAATCATACATTGGTCATTTGGCTGAAGAAACTTATATGTATAGGTCATTGCCTCTTGGTCTGGATCGGAGGCATAATCGATATTGGCAGTTCACTACATCTGCTTCTCAAAATGATCCAGGCTGTGGCAGGATTTTCGTGGAGTTGTATGATTGTCATTGGAGGCTTATTGATTCTGAAGAGGGCTTTGATGCTCTAATGGCATCGTTGGATGTGCGAGGGATGAGGGAATCTCATTTGCACATGATGTTGAATAGAATCAAGACGTCCTTCAAGGAATCCATTAAGAGGAATGTGCCTAATGCTATGAGGATGCAAAATGTAGACCTTTTGAAGACAAAATCTGTTGAAATGAGTAGAGGACAGGTTTGCAGTGCGATTAGTTCTGCCTGCAACATTGGTTCAGATGAGTCAGAGACCTCAACGTCTTTTCTGATTCAGAttggaaaaaatgaaaatgataaaaaagatgCTTTTAGGAGATATCAGGACTTTGAAAAGTGGATGCAGATGGAATGCCTAAATTCTTCTGTATTATTTGCAACGACATATGGGAAGAAGAGATGCAGTCAACTGCTGGGCATGTGTGATTATTGCCGTAACGTCGCTTTTACTGAAGAAGTTCCATGCTCTTCCTGTCATAGGACCCTTCGTACCTGTAATAGTAACTTCAATTCCGCAGAACATCTGGCTCAGAAGGACATAAAAGTAAAGGCAATCACAGattatccttttcttctttcaccGTCTTGTCCTTTGAGGATGAGACTGCTCAAAGTGCTATTCTCAGTATTAGAGGCATCTATTCCCAATGATGCTTTACAACCTCTTTGGACCGACAGCTATCGGAAATCTTGGAGCAGAATGTTGCGTGATTCTTCATTGGCTGAAGACCTTCTTCAGATATTGACTGTATTGGAGAGTGCTATAAAGAGAGAACATTTAGCTTCAAACTATGAAACTACCAGTGAGTTGTTGGGTTCCCGTAGTTCTTCTGGGTGTCTGGTTAAAGATACCATAGGTGCTGGAGGAATTCGTGTACTGCCATGGGTGCCGCGTACAACTGCTGCTGTGGCACTGAGATTCATGGAACTTGATGCATCCATCTTTTACACGTTACAGCAGAAGCTGGAGTCAGAAAAGgacaagaaaattaaggaTGTTGTGGTGAAGTTTTCGTCCAAAAGTACTTCTGCTAAGAATCCCCAAAGTGCTGGCGCAACTGAAACTTCAAACCAGGCTGAGCATACTAAAGAGAACTGGGTTGACTTGGGTGCTGGGCTTGCAAGCTACAGCCGAGGACAAAGGACCATTGGACGAGGCCGTGGTCTCTCTCGGGATGGGAGATCAAGGGGTAAAGGCACAAGTTCAAAATCTAAATCTCGAAAGACAGTCATTGCCACTAGGAGGAGACTGGGACAGGTACTAGGATGGAAAGAGAAACCTCGGGTGCAAGGAGGGCACAAACGTGGCCGTCGGAGCATTAGAATCAGGCAGAAACCAGCAGCTAATGATCCTCCCAAAGAAGATATCAAGGAGGAATCACCGGGTCTCATTGTCAGGGAGCAGTTTAATGGGGATGAAACCATCGGTTTTGAAATGGAAGCTGCTGGCAATGCTAGCATCTCAGAGAGATCTGACGAAGAGGataataagaataatcaaGCAACAGATGACGAGTATGATTATGGGTATGGGAGTGGGATtgaatataatagaaaatctGAGAACATAATACAAAGGAGTGACTATACTTTAGATGATGAGGAAGACGAAGATATTAATGATGATCTCGATGTGGATGTGGATGACTCAGATGGAATGGGATCTACATCATCATCAGATTACAGTGACTA 5198 0.4236 MEAGSEGEKKKPPEGENKTKRKMKTASQLEVLEKTYSVEPYPSESLRAELSAELGLSDRQLQMWFCHRRLKDRKASAQKKPRSDLTLGTVISTPVGGSAEQTMMDDITYEGASVSGLRPLCSLDSWQVVPRPGMAFPRIGGGLPAMDYYESQQCIAELRAIAFVEAQLGEPIREDGPILGMEFDPLPPDAFGAPIGSATMGQHGQSGRPFEAKIYERQDKGVSRTLHEYQFIPEKPTVRNEAHERVAPSHHYNSLEAIPHSRTSILSSGRSFYNGNETATYGYGFQGQIPRLNLLSEQGRQNHVLPSASGENVDVPQKNLLVDVAVDTHIGAYPITQIDNSLMPSDWRVIHGEELTRLQRKHKNEEARMQREIEVQEKRIRKELEKQDILKRKREEQVRKEMERQDRERRKEEERLLRERQREEERCQREQRRELERREKFLQKESIRAEKMRQKEELRRVKEAARIKTANERAVARRMAKESMELIEDERLELMELTASKKGLSSILSLDHETLHNLELYRDGQASFPPKSVRLKRPFSIQPWSDSEENVGNLLMVWRFLITFIDVLGMWPFTLDEFIQAFHDYDPRLLSEIHIALLKTIIKDIEDVARTPFTGVGTNQNSAANSGGGHLQVIEGAYVWGFDIRNWQRHLNLLTWPEILRQFALSAGFGPQLKKRNIERGYPCDNNEGNDFEDIISNLRTGVAVENAVAIMQERGLYNQRRSRHCLTPGTVKFAAFHVLSLEGSNGLTILEVAEKIQKSGLRDLTTSKTPEASIAAALSRDSKLFERTAPSTYCVRPAYRKDPANADSILSAARERIRIFKSGSLDTEEPDDGERDEDSESDVAEDNEVEDLAMGTNTKKEPLNSEEFNERNALRSRKDGGEVLRNPDDGYEKVSKGITSVPAEDLNAIKDTGESVDPSSEIAAGSNDVANSDVEDANIDESNLGEPWVLVLMEGEYSDLSVEERLNALVALIGVTIEGNSIRVALEERLEAANALKKQMWSEAQLDKRRLKDDCFVKIQSAPNTGNKNEPTVSVLSTEGKHSPLLTANEKNDEAIPTSLDQLEQTIDLQNNQNHLQSFHSEINTQIQDFFALPDNYSFQQSGYIAEKARSNLKSYIGHLAEETYMYRSLPLGLDRRHNRYWQFTTSASQNDPGCGRIFVELYDCHWRLIDSEEGFDALMASLDVRGMRESHLHMMLNRIKTSFKESIKRNVPNAMRMQNVDLLKTKSVEMSRGQVCSAISSACNIGSDESETSTSFLIQIGKNENDKKDAFRRYQDFEKWMQMECLNSSVLFATTYGKKRCSQLLGMCDYCRNVAFTEEVPCSSCHRTLRTCNSNFNSAEHLAQKDIKVKAITDYPFLLSPSCPLRMRLLKVLFSVLEASIPNDALQPLWTDSYRKSWSRMLRDSSLAEDLLQILTVLESAIKREHLASNYETTSELLGSRSSSGCLVKDTIGAGGIRVLPWVPRTTAAVALRFMELDASIFYTLQQKLESEKDKKIKDVVVKFSSKSTSAKNPQSAGATETSNQAEHTKENWVDLGAGLASYSRGQRTIGRGRGLSRDGRSRGKGTSSKSKSRKTVIATRRRLGQVLGWKEKPRVQGGHKRGRRSIRIRQKPAANDPPKEDIKEESPGLIVREQFNGDETIGFEMEAAGNASISERSDEEDNKNNQATDDEYDYGYGSGIEYNRKSENIIQRSDYTLDDEEDEDINDDLDVDVDDSDGMGSTSSSDYSD 1732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00658 1732 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1730 - -
Bva09g00658 1732 MobiDBLite consensus disorder prediction 913 932 - -
Bva09g00658 1732 SMART HOX_1 17 79 IPR001356 GO:0003677
Bva09g00658 1732 MobiDBLite consensus disorder prediction 830 850 - -
Bva09g00658 1732 MobiDBLite consensus disorder prediction 1 28 - -
Bva09g00658 1732 Coils Coil 355 393 - -
Bva09g00658 1732 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1129 1202 IPR028941 -
Bva09g00658 1732 MobiDBLite consensus disorder prediction 1510 1531 - -
Bva09g00658 1732 ProSiteProfiles DDT domain profile. 548 607 IPR018501 -
Bva09g00658 1732 MobiDBLite consensus disorder prediction 1554 1568 - -
Bva09g00658 1732 ProSiteProfiles HARE-type HTH domain profile. 730 799 IPR007759 GO:0006355
Bva09g00658 1732 SMART testlast3 548 607 IPR018501 -
Bva09g00658 1732 Pfam DDT domain 549 604 IPR018501 -
Bva09g00658 1732 MobiDBLite consensus disorder prediction 822 899 - -
Bva09g00658 1732 MobiDBLite consensus disorder prediction 1694 1732 - -
Bva09g00658 1732 MobiDBLite consensus disorder prediction 1549 1630 - -
Bva09g00658 1732 ProSiteProfiles 'Homeobox' domain profile. 15 75 IPR001356 GO:0003677
Bva09g00658 1732 MobiDBLite consensus disorder prediction 1699 1718 - -
Bva09g00658 1732 MobiDBLite consensus disorder prediction 864 893 - -
Bva09g00658 1732 Coils Coil 395 468 - -
Bva09g00658 1732 SUPERFAMILY Homeodomain-like 13 75 IPR009057 -
Bva09g00658 1732 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 947 985 IPR028942 -
Bva09g00658 1732 MobiDBLite consensus disorder prediction 395 430 - -
Bva09g00658 1732 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1730 IPR044977 GO:0006357
Bva09g00658 1732 Pfam Homeodomain 18 74 IPR001356 GO:0003677
Bva09g00658 1732 MobiDBLite consensus disorder prediction 1650 1682 - -
Bva09g00658 1732 Pfam HB1, ASXL, restriction endonuclease HTH domain 730 797 IPR007759 GO:0006355
Bva09g00658 1732 CDD homeodomain 18 74 IPR001356 GO:0003677
Bva09g00658 1732 Gene3D - 14 83 - -
Bva09g00658 1732 MobiDBLite consensus disorder prediction 1612 1630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00658 Bva-Chr9 3411764 3421859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00658 1 1537 Homeobox Transcription Factor Family AT5G44180 51.367 0.0 1369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Bva09g00658 WSD 4.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00658 - - gmx:100797480 1976.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00658 09 3411764 3421859 Bva09g00658 09 3411764 3421859 ECH