Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00657 ATGCGTGTGGATTATTACAAGATCTTGCAGGTTGATAAGAATGCCAAAGATGACGATTTGAAAAAGGCGTATAGGAAGCTTGCCATGAAGTGGCACCCTGATAAAAACCCCAATAACAAGAAAGATGCTGAAGCTAAATTCAAGCAAATTTCTGAAGCATACGAGGTGCTCAGTGATCCTCAGAAGAGAGCTATCTATGATCAATATGGTGAAGAGGGTTTGAAGGGTCAGGTACCGCCTCCTGATACTGGTggatcttctttcttttcgaGCGGAGATGGTCCCACATCATTCCGGTTCAATCCACGAAACGCAGAAGACATTTTTGCCGAGGTTTTTGGGCACTCTAGCCCGTTCTCAGGCATGGGTGGACATGGTGGTCTAGGGATGAGAACGAGGTTCCCTGGTGGAATTTTTGGTGGTGATGATGTATTTGGATCTTTTGGGGAAGGAGGGCAATTGAATCCTGGTGCTCCTCGTAAAGCTCCTCCAATTGAGAACAGGTTGACATGTAGTCTCGAAGACTTATACAAAGGAACTacaaaaaagatgaagatCTCTAGGGAAATTCTTGATGCCAACGGCAAATCCATGCAGGTAGAGGAGATCTTAAATATTGATGTCAAGCCTGGTTGGAAGAAGGGCACGAAGATCACCTACCTAGAGAAGGGAAACGAACAGCCAAATGTGACACCTGCAGACCTTGTTTTCATCATTGATGAGAAACCACATAGCGTGTTCACCCGTGATGGAAATGATCTGATCGTCACCCACAAGATTTCTCTAGCAGAGGCCTTAACTGGTTATACAGTGCAGCTCACTACCTTGGACGGCAGAAATTTAACAATACCAATTAATAACGTTATTCATCCCAACTACGAGGAAGTTGTCCCAAGAGAAGGGATGCCACTCCCAAAGGATCCTACGAAAAAGGGCAACTTGAGGATAAAGTTCAACATCAAGTTCCCAACTAGACTTACTGCCGAGCAGAAATCGGGAATCAAGAAACTCGTGGCTGCTTG 1022 0.4374 MRVDYYKILQVDKNAKDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYEVLSDPQKRAIYDQYGEEGLKGQVPPPDTGGSSFFSSGDGPTSFRFNPRNAEDIFAEVFGHSSPFSGMGGHGGLGMRTRFPGGIFGGDDVFGSFGEGGQLNPGAPRKAPPIENRLTCSLEDLYKGTTKKMKISREILDANGKSMQVEEILNIDVKPGWKKGTKITYLEKGNEQPNVTPADLVFIIDEKPHSVFTRDGNDLIVTHKISLAEALTGYTVQLTTLDGRNLTIPINNVIHPNYEEVVPREGMPLPKDPTKKGNLRIKFNIKFPTRLTAEQKSGIKKLVAA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00657 340 CDD DnaJ 4 59 IPR001623 -
Bva09g00657 340 PRINTS DnaJ domain signature 6 24 IPR001623 -
Bva09g00657 340 PRINTS DnaJ domain signature 24 39 IPR001623 -
Bva09g00657 340 PRINTS DnaJ domain signature 42 62 IPR001623 -
Bva09g00657 340 PRINTS DnaJ domain signature 62 81 IPR001623 -
Bva09g00657 340 MobiDBLite consensus disorder prediction 72 96 - -
Bva09g00657 340 Gene3D DnaJ domain 2 122 IPR036869 -
Bva09g00657 340 SUPERFAMILY Chaperone J-domain 3 99 IPR036869 -
Bva09g00657 340 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 339 - -
Bva09g00657 340 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Bva09g00657 340 Pfam DnaJ domain 4 67 IPR001623 -
Bva09g00657 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 164 244 IPR008971 GO:0006457|GO:0051082
Bva09g00657 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 246 332 IPR008971 GO:0006457|GO:0051082
Bva09g00657 340 Gene3D - 164 242 - -
Bva09g00657 340 CDD DnaJ_C 163 326 - -
Bva09g00657 340 SMART dnaj_3 3 62 IPR001623 -
Bva09g00657 340 Pfam DnaJ C terminal domain 165 323 IPR002939 -
Bva09g00657 340 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Bva09g00657 340 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 339 - -
Bva09g00657 340 Gene3D - 244 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00657 Bva-Chr9 3409416 3411763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00657 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 5.01e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00657 K09510 - gmx:100797487 539.265