Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00655 ATGCTAGCGGTGTCACCTTTGAGGAGCATCAAAGATGAAAGCCAAGGAGAGATGGAGAGGTTCTCGGTGGGCGCCGATGAGTTTGGAGAACTTTCCGATGGGAATTTACTGGAAAGCATCAACTTTGATGATCTCTTCGTGGCTATCAACGACGGAGATGTCTTGCCTGATTTGGAGATGGACCCAGAAATTCTTGCCGAGTTCTCCCTTAGCGGCGGGGAGGAATCGGAGTTAACCCCATCAGTTTCAGCAGatcacaataataataaagctcATGAAACTGCGTCTACggagaaagaagatgaagataaagCTTTTCCAGGTTCGGGTTCTGGAGAGGAGATATTGAGCAAAAAAGATGAACCTGCGAGGGTTAATCCATCTCCAAAGGAAGCTGACAAGGGAAGAAAATCATCATCCACTGCTCAATCTAAGAATTCtcaagggaaaagaaaagtgaagGTCGATTGGACCCCGGAATTGCACAGGCGATTTGTGCAAGCAGTTGAGCAGCTAGGAGCGGATAAGGCAGTCCCTTCAAGGATTTTGGAGATTATGGGAATTGATTGTCTCACTCGCCATAACATTGCCAGCCACCTTCAAAAATATCGGTCGCATAGGAAACATTTACTTGCTCGCGAAGCGGAAGCAGCAGGCTGGAGTCAGAGAAGGCAGATGTATGGATGCGGAGGAGAAGGGAAGAGACAGGTTAGCCCATGGCCAGCACCCACCATGGGTTTCCCTCCAATGAATCCAATGCACCATTTTAGACCCTTGCATGTATGGGGGCATCCCACCGTCGACCACTCTTTCATGCACATGTGGCCAAAGCACCCAGCACCGCCGTGGGCGCCAccgccaccaccaccactTGATCCTTCGTACTGGCACCAACCGCGGGCTCCTAACGGGCTAACCACTGGAGGACTGTGTTTTCCACAATCTCTGACTACACCGAGATTAATTGGCTCCTCTCCTCCTGTCCCGGGCATCCCACCCCATGCCATGTACAAAGTAGATCCCGGCATTGGCGTGCCGACCGGGCAACCGCCAGCCCCACGGCCTGTCTGCGACCTCCACCCTTCAAAGGAGAGCATTGATGCAGCCATTGGAGATGTTTTATCAAAGCCATGGCTGCCGCTGCCACTTGGTCTTAAAGCTCCGGCGCTTGATATCGTGATGAGTGAATTACAGCGACAAGGAATTCCCAAAATTCCACCCTCTTGTGCTTG 1232 0.4838 MLAVSPLRSIKDESQGEMERFSVGADEFGELSDGNLLESINFDDLFVAINDGDVLPDLEMDPEILAEFSLSGGEESELTPSVSADHNNNKAHETASTEKEDEDKAFPGSGSGEEILSKKDEPARVNPSPKEADKGRKSSSTAQSKNSQGKRKVKVDWTPELHRRFVQAVEQLGADKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAAGWSQRRQMYGCGGEGKRQVSPWPAPTMGFPPMNPMHHFRPLHVWGHPTVDHSFMHMWPKHPAPPWAPPPPPPLDPSYWHQPRAPNGLTTGGLCFPQSLTTPRLIGSSPPVPGIPPHAMYKVDPGIGVPTGQPPAPRPVCDLHPSKESIDAAIGDVLSKPWLPLPLGLKAPALDIVMSELQRQGIPKIPPSCA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00655 410 MobiDBLite consensus disorder prediction 74 90 - -
Bva09g00655 410 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 410 - -
Bva09g00655 410 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 152 206 IPR006447 GO:0003677
Bva09g00655 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 149 208 IPR017930 -
Bva09g00655 410 MobiDBLite consensus disorder prediction 1 25 - -
Bva09g00655 410 MobiDBLite consensus disorder prediction 71 155 - -
Bva09g00655 410 Gene3D - 149 210 - -
Bva09g00655 410 SUPERFAMILY Homeodomain-like 150 209 IPR009057 -
Bva09g00655 410 Pfam Myb-like DNA-binding domain 155 204 IPR001005 -
Bva09g00655 410 MobiDBLite consensus disorder prediction 91 138 - -
Bva09g00655 410 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 410 IPR044825 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00655 Bva-Chr9 3401009 3403792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00655 29 278 G2-like Transcription Factor Family AT5G44190 49.020 5.28e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva09g00655 Myb_DNA-binding 8.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00655 - - jre:109001455 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00655 09 3401009 3403792 Bva09g00655 09 3401009 3403792 ECH