Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00643 atgGCAGGCAAAGAAATCCTCCATAAGATAAAGGAGAAAGCTGGATTTGGTACATCAGCAGCTGACACAGGGAAAGGAAAGAGCAAAATTTCCAAGCATATCACACATGGATTTCACTTAAAGAAGGGAAAATCAGGACACCCTATGGAAGATTACGTAGTTTCAGAATTTAAGCAAGAAAAGGATAAAGAGTTAGGCTTGTTTGCGATATTTGATGGTCATTTAGGCCATGATGTTGCAAACTATTTGCAGAACCACCTTTTTGACAACATTTTAAAACAGGAAGACTTCTGGACCGACCCAAAAAGCGCAGTAAAGAGAGCTTACCTTACAACAGATGAGAAAATACTGGAACAATCACTTGTCTTGGGAAGAGGAGGTTCCACCGCAGTAACTGCAGTACTCATTAACGGTCAGAAGCTCGTAGTAGGAAATGTTGGAGACTCTCGAGCTGTTATTTGCAAGAATGGGAAGGCCAAGCAACTATCGGTTGATCATGAACCAAGCAAGGAAAAAAGGGATATTGAGAGCCGTGGTGGTTTTGTATCAAAAATTCCAGGAGATGTTCCTCGCGTGGATGGTCAACTAGCAGTAGCTAGGGCTTTTGGCGATAAAAGCTTGAAGATGCATCTCAGTTCAGAACCTGATGTGGTAATAGAGACAGTCGATGAAGCTGCGGAGTTCCTTATTCTGGCAAGTGATGGAATATGGCAGGTAATGTCAAACCAAGATGCAGTGGACTCTATCAGACACATAAAGGATGCTCAGGATGCAGCAAAGCACCTGATAGAAGACGCCGTTACTAAGAAAAGTAAGGACGACATATCCTGCATAGTTGTCAAGTTCCGATG 851 0.4254 MAGKEILHKIKEKAGFGTSAADTGKGKSKISKHITHGFHLKKGKSGHPMEDYVVSEFKQEKDKELGLFAIFDGHLGHDVANYLQNHLFDNILKQEDFWTDPKSAVKRAYLTTDEKILEQSLVLGRGGSTAVTAVLINGQKLVVGNVGDSRAVICKNGKAKQLSVDHEPSKEKRDIESRGGFVSKIPGDVPRVDGQLAVARAFGDKSLKMHLSSEPDVVIETVDEAAEFLILASDGIWQVMSNQDAVDSIRHIKDAQDAAKHLIEDAVTKKSKDDISCIVVKFR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00643 283 PANTHER PROTEIN PHOSPHATASE 2C 1 282 IPR015655 GO:0004722|GO:0006470
Bva09g00643 283 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 282 - -
Bva09g00643 283 SUPERFAMILY PP2C-like 31 282 IPR036457 -
Bva09g00643 283 Gene3D - 29 283 IPR036457 -
Bva09g00643 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Bva09g00643 283 CDD PP2Cc 36 282 IPR001932 -
Bva09g00643 283 Pfam Protein phosphatase 2C 46 275 IPR001932 -
Bva09g00643 283 SMART PP2C_4 25 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00643 Bva-Chr9 3350868 3353042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00643 1 283 PP2C-type Phosphatase Gene Family AT3G15260 69.550 2.92e-145 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00643 K17506 - gmx:100819846 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00643 09 3350868 3353042 Bva09g00643 09 3350868 3353042 ECH