Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00624 ATGAAAGCTACAAACTTTTCCACCCCTCTTCCCTTTGTAACCTCTTTCATCTTCTCCATTGCCCCTTGTAAAGGATTCCTTCCTGGTCATGGTTTTGCTTTTATATTCTCACCCACAATGAACCTAACTGGCGCGACCTCAGGAAATTATCTGGGTCTTTTTAATCGTTCCGATGAAGGTAATCCTTCAAACCATGTTTTTGGCattgaatttgatatttttagaaatgaagaatttgatgACATAAATGATAATCATGTCGGTGTTGACATAAACTCACTATCATCCTTGTACTCAGAACCTGCTGGGTTCTGGGGTGGAAGAGATGGTGAGGAATTAGAGGAGTTGTTGCTGGGTAATCGAGAAAATTATCAAGTTTGGATAGAGTTTGTGGATTCAAGGCTAAATGTTACTATGACTCGAGCAGGGAAAAGGAAGCCTCAGAAGCCTTTGATTACTAGGCATATTAACCTTTCTGAGGTTTTGTTAAATGAAATGTATGTTGGGTTTTCTGGAGGAACAGGGAGACTGGTGGACATTTGCAGAATTTTGGCTTGGAGTTTTAGCAATTCTAACTTTTCGATCGGTGATACATTGTTGACAGAAGATTTGCCTTCATTTGTGCAGCCAAAGGTTATGTTTTTTACATCAGAGAAATTCATTGCAGGTGTCTCCGTTTGTGTTCTGTTTTTCACCAGCTGTTTCATTTGGGTACTTTCGAGTTTGCccacaaaggaaaaagaagaattggaAGGTTGGGAATTGGAGTATTGGCCACACAGGATAAGCTACCAAGAGATTTGTGCAGCAACAAGGGGATTCTCTGAAGAGAACTTAATTGGGGTAGGAACAAGTGGGAGAGTCTATAAAGGAGTTCTGCGAGGAGTAGAAGTTGCAATCAAGAAAATCCCTTATGAAACTCAGCATGGGTTGAAAGAGTTTCTGGCTGAGATTTCAAGCCTAGGCAGAttgaaacacaaaaatatagtGGGATTCAGAGGTTggtgtaaaaggaaaagaggaagCTTGATGCTGGTTTATGATTGTATGGACAATGGAAGCTTGGACAAGAGGATTTTTGAGTGTGAAGAGAGCATGCTGCTGAACTGGGAAGAAAGAATCAGTGTTCTAAAAAACGTAGCTCATGGAATTTTATACCTTCATGAAGGTTGGGAAGTTGAGGTCCTGCATAGAGACATCAAAGCAGGCAATGTGTTACTTGATAAGGACATGAATGCAAGGTTGGGGGATTTTGGGCTAGCCAAATTGCATCATCAAGAGCACTTGGGTGACACCAGAGTAATTGGGACTCTGGGGTACATGGCACCTGAGCTAGTTCGAATTGGTTCACCTTCAACTGCAACAGATGTGTACAGTTTTGGGATATTGGTTTTAGAAGTGGTTTGTGGGCGAAGACCCATTGAAGCAGATAAGCCAGCATTGCTTGAATGGGTATTGTACCTAATGGAGAGTGGCAAATTGCATATTGCTCTTGATGAGCGCTTAAAGGCTCAAGGTGGGTATGCCATTGAGGAAGTTGAGAGAGTTCTTCATCTGGGTTTGTGTTGTGCAAGTTCAGAACCTAGTGTTAGGCCATCAATGAGGAAGGTCGTCAAAGTGCTGGAGGGGGAAATTACAGACAACGATTCAAGTGAAAACTCTTGTAATTTGAGCTtgcttgagaaaataaattcagcAGCAATGTGGTCTAGGAGTACCGCTTCTGATTCTAGAAATTATCTTACTTTTGAGGAAATTTTGCAGTCCAAATTTTATACCACAACTTCTATAAGTGACTCTTGTCCCGCGTTACAATCAGAGTCTGACATTGTCTCAGATGGAAAGTG 1847 0.3925 MKATNFSTPLPFVTSFIFSIAPCKGFLPGHGFAFIFSPTMNLTGATSGNYLGLFNRSDEGNPSNHVFGIEFDIFRNEEFDDINDNHVGVDINSLSSLYSEPAGFWGGRDGEELEELLLGNRENYQVWIEFVDSRLNVTMTRAGKRKPQKPLITRHINLSEVLLNEMYVGFSGGTGRLVDICRILAWSFSNSNFSIGDTLLTEDLPSFVQPKVMFFTSEKFIAGVSVCVLFFTSCFIWVLSSLPTKEKEELEGWELEYWPHRISYQEICAATRGFSEENLIGVGTSGRVYKGVLRGVEVAIKKIPYETQHGLKEFLAEISSLGRLKHKNIVGFRGWCKRKRGSLMLVYDCMDNGSLDKRIFECEESMLLNWEERISVLKNVAHGILYLHEGWEVEVLHRDIKAGNVLLDKDMNARLGDFGLAKLHHQEHLGDTRVIGTLGYMAPELVRIGSPSTATDVYSFGILVLEVVCGRRPIEADKPALLEWVLYLMESGKLHIALDERLKAQGGYAIEEVERVLHLGLCCASSEPSVRPSMRKVVKVLEGEITDNDSSENSCNLSLLEKINSAAMWSRSTASDSRNYLTFEEILQSKFYTTTSISDSCPALQSESDIVSDGK 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00624 615 ProSitePatterns Protein kinases ATP-binding region signature. 280 302 IPR017441 GO:0005524
Bva09g00624 615 Pfam Legume lectin domain 11 192 IPR001220 GO:0030246
Bva09g00624 615 SMART serkin_6 274 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00624 615 Pfam Protein kinase domain 275 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00624 615 CDD lectin_legume_LecRK_Arcelin_ConA 7 191 IPR001220 GO:0030246
Bva09g00624 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Bva09g00624 615 SUPERFAMILY Protein kinase-like (PK-like) 253 542 IPR011009 -
Bva09g00624 615 Gene3D Phosphorylase Kinase; domain 1 240 348 - -
Bva09g00624 615 PANTHER LECTIN RECEPTOR KINASE 2 600 - -
Bva09g00624 615 PANTHER - 2 600 - -
Bva09g00624 615 SUPERFAMILY Concanavalin A-like lectins/glucanases 9 190 IPR013320 -
Bva09g00624 615 Gene3D Transferase(Phosphotransferase) domain 1 350 564 - -
Bva09g00624 615 Gene3D - 2 199 - -
Bva09g00624 615 ProSiteProfiles Protein kinase domain profile. 274 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00624 Bva-Chr9 3283116 3284963 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00624 7 490 Receptor kinase-like Gene Family AT4G04960 55.758 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva09g00624 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00624 - - gmx:100804025 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00624 09 3283116 3284963 Bva07g02005 07 17468212 17469957 BWGD