Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00623 ATGTCGAAAACCATCTCATCTATAGGCAAGCACTTCCCCATGTCTCCACTTACTCTCCTCTATTTTGCCATCCTCCATACTGCAAAAATTTTCTGCCTAGTGTCAGCTACTGAATTTGTGTACAACACAAACTTCAACTCCACCAATGTCAAGCTCTATGGTGATGCCACCGTTGAATCTTCCATTCTGTCTCTCACCAATCACAGTTCATTCTCCCTTGGCCGTGCTTTCTACCCTGAGAAGATACCCATGAAGCAGGCTAACTCTTCcacccttttctcttttgcaacctccttcattttctctatAGCCCCCGTTAAAGGCTTTATAACTGCTCATGggtttgctttcttcttctcaccTCATAGGGGCACTACTGGTGCGTCCGCAGCTCAGTATTTTGGTCTGTTAAACTTTACCAATCAAGATAATCCTCTCAACCATGTTTTAGGAGTTGAGTTTGATATATTTAGCAACGAAGAATTCAATGATATCAATGACAATCATGTTGGTATTGATATAAACTCACTTACTTCCTCTTATTCATATGAGGCGGGCTATTGGGATGGAAATGatgataagaaatttaagaagCTGGAgttgaaaaatggaaaaaattatCAGGTATGGATTGAGTTTATGGATTCAAAACTCAATGTCACAATGGCTCTGGCAGGGAATAAGAAGCCTCGAAGGCCTCTGATTAGCAGGACTGTTAATCTTTCTGAAGTACTGTTAGAGGAAATGTATGCTGGGTTTTGTGCAGCAACAGGGATTATGGTAGACAGTGTTAGAATTCTGGCTTGGAGTTTTAgtaattctaaattttccaTTGGTGATGCTTTGGTCACGAACAATTTGCCATCATTTGTGCCTCGCAAAGGGTTGTTTTCTGAATTACCTGCTCTAATCATAGGGGTTAGTATCGTTTGCATCTTAGTAATTGGTTGTGGTTCTGTGGTGTTTTTCATTCTATGGAGGGGGAAAGGTAAGGcagaggaagaaattgaagagtgGGAGTTGCATTACTGGCCCCATAGGATTAGTTACCAAGAGATTGATGCAGCAACAAGAGGGTTCTCAGAAGAGAATGTGGTTGCGATTGGAGGAAATGGGAAGGTATATAAAGGGATTTTGCAGGGAGAAGAAGTTGCAGTCAAGAAAATAACTCAAGAAGCTGAGGAAGGGATGAGAGAGTTTATGGCTGAGCTTTCAAGCTTAGGCAGAATGAAACACAGAAATTTAGTTGGGTTGAGAGGTTGGTGcaagaaagagaagggaagCTTTATATTAGTATATGATTATGTGGAGAATGGAAGTTTGGACAAATGGATTTTTGAGCGTGAAGAGGGAAAGATGCTTAGTTGGGAAGGGAGACTTAAAGTTTTGAAAGATATAGCTTTTGGAATTCTATATCTACATGAGGGTTGGGAAGTTAAAGTCTTGCATAGGGATATTAAAGCAAGTAATGTTTTACTTGATAAGGATATGAATGCTAGGTTGGGGGATTTCGGATTAGCTAGGCTTCATGATCATCAAGGGCAAGTTGCCAGCACAACAAGAGTAATAGGAACAGTTGGATACTTGGCTCCTGAAGTGGTAAAAGCAGGAAAATTCTCAACTCTATCTGATGTGTTTGGCTTTGGAATGCTGGTTTTAGAAGTGGTCTGCGGGAGAAGACCCATTGAAGAAGGCAAGCAAGGACTAGTTAAGTGGTTACTTTCCCTAATGGAGATTGGTGAACTGCATTGTGCTCTTGATCAGCGGTTGAAGGCCAAAGGAGGATACACCATAgaagaagttgagaaattgcTTCATCTGGGATTGTCATGTGCGAATTCAGATCCTAGTGTTAGACCAACAATGAGGCAGATAGTGAAGATGCTAGAAGAGGAGGAGGGAATGGAAGGCAATGACTCAGATGGGGACAGTGTGGAAACGAGTTtgcttagaaaaataaaatcatcagCAATGTGGTCCGGAACTGCTGCTTCTTGTTCCTCCAGTGCTTACCCCACCATTGGTGATATTATGtccatttttaattctaatagTGTATA 2060 0.3762 MSKTISSIGKHFPMSPLTLLYFAILHTAKIFCLVSATEFVYNTNFNSTNVKLYGDATVESSILSLTNHSSFSLGRAFYPEKIPMKQANSSTLFSFATSFIFSIAPVKGFITAHGFAFFFSPHRGTTGASAAQYFGLLNFTNQDNPLNHVLGVEFDIFSNEEFNDINDNHVGIDINSLTSSYSYEAGYWDGNDDKKFKKLELKNGKNYQVWIEFMDSKLNVTMALAGNKKPRRPLISRTVNLSEVLLEEMYAGFCAATGIMVDSVRILAWSFSNSKFSIGDALVTNNLPSFVPRKGLFSELPALIIGVSIVCILVIGCGSVVFFILWRGKGKAEEEIEEWELHYWPHRISYQEIDAATRGFSEENVVAIGGNGKVYKGILQGEEVAVKKITQEAEEGMREFMAELSSLGRMKHRNLVGLRGWCKKEKGSFILVYDYVENGSLDKWIFEREEGKMLSWEGRLKVLKDIAFGILYLHEGWEVKVLHRDIKASNVLLDKDMNARLGDFGLARLHDHQGQVASTTRVIGTVGYLAPEVVKAGKFSTLSDVFGFGMLVLEVVCGRRPIEEGKQGLVKWLLSLMEIGELHCALDQRLKAKGGYTIEEVEKLLHLGLSCANSDPSVRPTMRQIVKMLEEEEGMEGNDSDGDSVETSLLRKIKSSAMWSGTAASCSSSAYPTIGDIMSIFNSNSV 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00623 686 PANTHER LECTIN RECEPTOR KINASE 14 680 - -
Bva09g00623 686 SUPERFAMILY Protein kinase-like (PK-like) 337 630 IPR011009 -
Bva09g00623 686 Pfam Legume lectin domain 37 275 IPR001220 GO:0030246
Bva09g00623 686 Gene3D Transferase(Phosphotransferase) domain 1 436 649 - -
Bva09g00623 686 Pfam Protein kinase domain 363 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00623 686 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 274 IPR013320 -
Bva09g00623 686 Gene3D Phosphorylase Kinase; domain 1 326 435 - -
Bva09g00623 686 CDD STKc_IRAK 369 627 - -
Bva09g00623 686 CDD lectin_legume_LecRK_Arcelin_ConA 37 274 IPR001220 GO:0030246
Bva09g00623 686 SMART serkin_6 360 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00623 686 Gene3D - 35 285 - -
Bva09g00623 686 PANTHER - 14 680 - -
Bva09g00623 686 ProSiteProfiles Protein kinase domain profile. 360 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00623 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00623 Bva-Chr9 3280284 3282363 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00623 34 578 Receptor kinase-like Gene Family AT4G04960 57.065 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva09g00623 Pkinase 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00623 - - gmx:100804553 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02005 07 17468212 17469957 Bva09g00623 09 3280284 3282363 BWGD