Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00621 ATGGGTTGCATATCTTCCAAAAGTGCAGCTGTGGAAGACAGCCGGGAAGGATTGACAAAGAAATTGTCATCATCTAGCAAAAGGTCATCGGAGCTGAATGTTTCACGACTGAATTCCTCGATGAGGCACGAGGGAGTCTGGGCAAAAGCTAAATTAGATAGCAGTGATGTGAAAGTTTCGCTAATTGACAATAAAGCCCATAGTTCAGTGATTTTGTATGACGATCACATTGGGAAGAAGAAAGTACAGAAACCTGAGCTTACTGTTCTTGATTACCCTGGTCTTGGAAGGGTTCCAAAGGCTACAGAAGGAGAGCAAGTTGCAGCAGGATGGCCGGCTTGGCTTTCTTCGGTTGCTGGTGAATCTATCAAGGGATGGTTACCACGAAGTGCAAATACTTTTGAGAGGTCACAAAAAATTGGCCAAGGAACTTACAGTACTGTTTATAAGGCACGCGATCTGACTCACCAAAAGATTGTTGCTTTGAAAAGAGTGCGATTTGATAACCTTGATCCAGAGAGTGTGAAGTTTATGGCAAGGGAAATCTTTATCCTACGTAGGCTCGACCatccaaatataataaagttgGATGGGTTGATAACATCTGAGTCATCTCGCAGCTTGTACCTTGTGTTTGAGTATATGGAGCATGATCTCACAGGACTAGCAGCACTTCCCGGCATTAAATTTACAGAACCACAGGTTAAATGCTATATGGAGCAACTTCTTAGTGGATTGGATCATTGTCATAGTCGTGGTATCCTCCACCGTGACATAAAAGGCTCAAATCTTCTCATTGACAACAATGGCATACTAAAGATTGCAGATTTTGGTTTAGCAAGTTATTTTGATCCCCATCACAGTGTTCCATTGACCAGCCGTGTAGTGACACTGTGGTATAGACCACCAGAACTTTTACTCGGGGCATCTAATTATGGAGTTGCTGTGGATTTGTGGAGTACTGGTTGCATACTGGGAGAACTATGTTCTGGCAGGCCGATATTGCCAGGCAAAACAGAGGTCGAGCAATTGCATAGGATTTTTAAGCTTTGTGGCTCACCGTCTGAAGACTATTGGCTTAAGTTGCGGCTACCGCATTCAACAGTATTCAAGCCTCCACACCATTACAGACGTTGTGTTGCAGAAACGTTTAAGGATCATCCATCTTCTGCCGTGAGGCTTATAGAGACCCTACTTTCCCTGGATCCTTCTGATCGAGGAACAGCAGCTGCTGCTTTGAAAAGCGAGTTCTTTACAACGGAACCCCTTGCTTGTGATCCATCAAGTTTACCAAAATATCCTCCCAGCAAAGAGATTGATGCAAAATTGCGCGAAGAAGCAAACAGAAGGCAAGGAGAAGCTGGAGGAAGAGAGCAGAAAGCTGGTTCGGGAGTTAGACAAGAACCTCGGATGCAGCAAGGACAGAAGCATTCCAACTCAAAGAACAGGAATGAATTGTTCAATCCTCACGGGAAACCTGTTTCTGGAGTTTTAGCTTTTCCACATAAACAGTCAGAAAATAgtaaagaaatggaaaacaaTTTCTCTGGGCCTCTTTATAAAAGGCCTTCACATTATTCAGGTCCATTGGTTTATGGTCCTGGCTGGGCAAAGGATGGAAAGGATGCTGATAAACATCCTCCTATTTCGAACAGAGCCAACCTATCAAAACCATCTAGTTTAGTGGCATCTAGGACATTACCATCTGATCATCAGGTAGAAAAACCAGTTCCCTCGCAGCCCAAGAAACCGTTTGAAGTACATAAGTCTTCGGAGTTAACTAATGGATCAGATTCAAGAAGGAGACTGGATGAAAGACGGCAGTCTCAGAGACTTGCAGATTTCTGtcaaatagaaaatggaagagCCCCCATTCGTGAATCAACTCCGGAGAGGCGTGGATCCAGAGGCAACAGCAACAATATCTATCTTTCCGGTCCTATACTTGTTTCGTCAAACAATATGGATCAGATACTAAAAGAGCATGATCAAAAGATCCAGAAATATTCAAGACGAGCACGAAATGACAAGAGATA 2036 0.4258 MGCISSKSAAVEDSREGLTKKLSSSSKRSSELNVSRLNSSMRHEGVWAKAKLDSSDVKVSLIDNKAHSSVILYDDHIGKKKVQKPELTVLDYPGLGRVPKATEGEQVAAGWPAWLSSVAGESIKGWLPRSANTFERSQKIGQGTYSTVYKARDLTHQKIVALKRVRFDNLDPESVKFMAREIFILRRLDHPNIIKLDGLITSESSRSLYLVFEYMEHDLTGLAALPGIKFTEPQVKCYMEQLLSGLDHCHSRGILHRDIKGSNLLIDNNGILKIADFGLASYFDPHHSVPLTSRVVTLWYRPPELLLGASNYGVAVDLWSTGCILGELCSGRPILPGKTEVEQLHRIFKLCGSPSEDYWLKLRLPHSTVFKPPHHYRRCVAETFKDHPSSAVRLIETLLSLDPSDRGTAAAALKSEFFTTEPLACDPSSLPKYPPSKEIDAKLREEANRRQGEAGGREQKAGSGVRQEPRMQQGQKHSNSKNRNELFNPHGKPVSGVLAFPHKQSENSKEMENNFSGPLYKRPSHYSGPLVYGPGWAKDGKDADKHPPISNRANLSKPSSLVASRTLPSDHQVEKPVPSQPKKPFEVHKSSELTNGSDSRRRLDERRQSQRLADFCQIENGRAPIRESTPERRGSRGNSNNIYLSGPILVSSNNMDQILKEHDQKIQKYSRRARNDKR 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00621 678 SUPERFAMILY Protein kinase-like (PK-like) 128 424 IPR011009 -
Bva09g00621 678 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
Bva09g00621 678 MobiDBLite consensus disorder prediction 1 37 - -
Bva09g00621 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Bva09g00621 678 MobiDBLite consensus disorder prediction 581 612 - -
Bva09g00621 678 MobiDBLite consensus disorder prediction 537 642 - -
Bva09g00621 678 MobiDBLite consensus disorder prediction 23 37 - -
Bva09g00621 678 Gene3D Phosphorylase Kinase; domain 1 128 221 - -
Bva09g00621 678 MobiDBLite consensus disorder prediction 466 486 - -
Bva09g00621 678 PANTHER CELL DIVISION PROTEIN KINASE 2 672 - -
Bva09g00621 678 MobiDBLite consensus disorder prediction 446 525 - -
Bva09g00621 678 CDD STKc_CDK9_like 134 418 - -
Bva09g00621 678 SMART serkin_6 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00621 678 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00621 678 MobiDBLite consensus disorder prediction 552 567 - -
Bva09g00621 678 Pfam Protein kinase domain 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00621 678 Coils Coil 659 678 - -
Bva09g00621 678 PANTHER CYCLIN-DEPENDENT KINASE 2 672 - -
Bva09g00621 678 Gene3D Transferase(Phosphotransferase) domain 1 222 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00621 Bva-Chr9 3270293 3275278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00621 126 478 Core Cell Cycle Gene Families AT5G10270 48.118 8.49e-113 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bva09g00621 Pkinase 1.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00621 - - gmx:100807590 943.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00621 09 3270293 3275278 Bva07g02006 07 17472469 17477517 BWGD
Bva09g00621 09 3270293 3275278 Bva09g00621 09 3270293 3275278 ECH