Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00617 atggAACCTCTGCTGCTAAAAGGAGAAACCAGTGGCCAGAGGGAGCGCGCGACGGGGCTATTTCGTCGATCAGATGCAATCGCTTATGGCTCGCCATATCAGAAAGCGGCGGCACTTGTCGATCtgGCTGAAGATGGTGTTGGTCTACCGGAGCAGATTCTTGATTCATCAAACTTTCAAAGTTCTGCTGGGCTATATTTCATATTCacaaaatttgatatcatCTGGTCCCTTAATTATTTTGCCTTGTTAGTCCTGAATTTCCTTGAGAAACCTTTGTGGTGTGCTAAGTCCACCACTTACTCTTGCAACGACAGAGAGTATTTCTTTCTTGGACAGTTGCCATATCTAACTGGAGCAGAATCTCTTATTTATGAGGGAATAACTCTTCTTATCCTAGTCATGCATATTTTCTTCCCAATATCATATGAAGGGTCTCGTATATACTGGAAAAACTCTGTTAATCAATTGAAGGTCTTCTGTCTATTAGTTCTAGTTGCAGATATGCTGGTTTATTCTCTATATTTGTCACCAGTTGCTTTTGACTCTCTACCTTTCAGAATTGCACCTTATATCAGGGTTGTTCTTTTCATTCTGAATATTAGGGAGCTACGAGCAAGCATTGTCATTTTGACTGGAATGCTAAATACATACATAAACGTTTTGGCTTTAGGActtctgtttcttctttttgcaaGTTGGGTAGCCTATGTGATGTTTGAAGATACACAACAGGGGAAAACGTTATTTACTTCCTATGGAACCACATTGTATcaaatgtttgttttatttaccACATCCAATAATCCAGATGTCTGGATTCCTGCGTACAAGGCTTCGCGTTGGTATTGCTTGTTTTTTGTTCTGTACGTGCTACTGGGGGTTTACTTTGTGACAAACTTGGTCCTTGCTGTTGTTTATGACAGCTTCAAGAGTgagCTTGCAAAACAAGTTTCAGAGATGGATTTTATGAGACGAAATATGTTGGAGAAAGCTTTCATTCTCTTAGCTCATGATCCAGCTGGACATCTTAACAAGGATCAATGCATTAAACTCTTTGAGGAGCTGAACAAGTACAGGACCTTGCCGAAAATGTCAAAGGAAGAATTTGGGTTGATATTTGATGAGCTGGATGATAGTCATGATGTAAAGatCAACAAGGATGAATTTGCTGATTTATGCAATGCCATTGCATTAAAATTCCAGAAGGAGGACGTTCCATCTTACTTTGAGTATTTACAATTCTACGGTTCACCTCTctccaaaaatttgaaagaatttgTGCGGAGCCCCAAGTTTGGATACATAGTGTCCTTCCTTCTTGTACTAAATTTGGTCGCCGTTATTATTGAGACAACGCttgatatagaaaataattctgcACAAAAGGTGTGGCAAGTGGTGGAGTTTGTTTTTGGGTGGATATATGTAATAGAAATGGCTCTAAAAGTTTATTCATATGGATTTGAGAACTATTGGCGGGATGATCAAAACCGCTTTGACTTTATGATCACTTGGATAATCGTCATTGGAGAAACTATAACTTTTGTATCACCCGATGAACTGAGCTTTTTTACAAACGGAGAATGGATTCGTTACCTCCTCCTTGCACGAATGCTGAGGTTGATAAGGCTCTTAATGCATGTCCAGCGGTGCCGAGCCTTTGTTGCAACTTTTTTAACCCTCATTCCAAGTTTGATGCCGTACCTAGGGACTATATTTTGTGTCTTGTGTATTTATTGCTCACTTGGTGTACagatCTTTGGTGGAATTGTCAATGCTGGAAACCCCAAATTGGAATCAACAGATCTTGCTGATGATGACTAtttgcttttcaattttaatgacTACCCAAATGGAATGGTGACGCTTTTCAATTTGTTGGTAATGGGGAACTGGCAAGTGTGGATGCAGAGCTACAAGGAATTAACTGGCACTGCTTGGACCTATGCATATTTCATTAGCTTCTACATAATTACGGTGTTGCTTCTTTTGAATTTGGTTGTTGCTTTTGTCTTGGAAGCCTTCTTTGCTGAAATGGAGCTTGAGTCATCAGATGAAGACCATGACAAGGAACATGAAGGGGAGAAATATCAAAGAGCACGATCTATTGGGACAAAAACACGAAGCCAGAGGGCTGtcattcttcttcatcatatGTTGAGTGCTGAGTTGTGTCAAAAAGACTCTTCTAATCCATA 2201 0.3771 MEPLLLKGETSGQRERATGLFRRSDAIAYGSPYQKAAALVDLAEDGVGLPEQILDSSNFQSSAGLYFIFTKFDIIWSLNYFALLVLNFLEKPLWCAKSTTYSCNDREYFFLGQLPYLTGAESLIYEGITLLILVMHIFFPISYEGSRIYWKNSVNQLKVFCLLVLVADMLVYSLYLSPVAFDSLPFRIAPYIRVVLFILNIRELRASIVILTGMLNTYINVLALGLLFLLFASWVAYVMFEDTQQGKTLFTSYGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLLGVYFVTNLVLAVVYDSFKSELAKQVSEMDFMRRNMLEKAFILLAHDPAGHLNKDQCIKLFEELNKYRTLPKMSKEEFGLIFDELDDSHDVKINKDEFADLCNAIALKFQKEDVPSYFEYLQFYGSPLSKNLKEFVRSPKFGYIVSFLLVLNLVAVIIETTLDIENNSAQKVWQVVEFVFGWIYVIEMALKVYSYGFENYWRDDQNRFDFMITWIIVIGETITFVSPDELSFFTNGEWIRYLLLARMLRLIRLLMHVQRCRAFVATFLTLIPSLMPYLGTIFCVLCIYCSLGVQIFGGIVNAGNPKLESTDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTYAYFISFYIITVLLLLNLVVAFVLEAFFAEMELESSDEDHDKEHEGEKYQRARSIGTKTRSQRAVILLHHMLSAELCQKDSSNP 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00617 733 Gene3D - 330 396 - -
Bva09g00617 733 Gene3D - 556 714 - -
Bva09g00617 733 Gene3D - 210 329 - -
Bva09g00617 733 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 5 730 IPR044581 GO:0005245
Bva09g00617 733 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Bva09g00617 733 Pfam Ion transport protein 131 312 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva09g00617 733 Pfam Ion transport protein 433 677 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva09g00617 733 SUPERFAMILY Voltage-gated potassium channels 430 676 - -
Bva09g00617 733 Gene3D - 423 555 IPR027359 -
Bva09g00617 733 SUPERFAMILY EF-hand 324 412 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00617 Bva-Chr9 3247253 3258165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00617 2 732 Ion Channels AT4G03560 70.492 0.0 1087
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00617 K16900 - mnt:21385523 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00617 09 3247253 3258165 Bva09g00617 09 3247253 3258165 ECH