Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00610 ATGGACTTAGATCGGTACTTTGAGAATGCTGTGCCGCAAATTGATCCTTTTGGAGAAGACAAGTCCTTTGAGAAGTGGAATTCTGCCACCATAGATGCTGATACAGATTCTGATAGGAATGGCTTTGACTGCAATATCTGTCTTGATATTGTGCAAGATCCAGTGGTCACTCTCTGTGGCCATCTTTTCTGCTGGCCTTGCATTTACAAGTGGCTGCATTTCCACACCATCTCCTCAGAATACGAAGAGCAGCATAGACCACAGTGCCCAGTTTGTAAATCACAAGTTTCTCAATCATCCCTTGTTCCATTATACGGCCGTGGCAGCACCACTAAACCTTCTAAAGGCCACGAAGCCATGGCGATACCACGAAGACCCCTTGGCCCTGCATCGATGCTTGATTCATCAAGATCAACCAGTACTCGCCATCGGGCTTCACAATTTTATCATCGCCATTATCCTCAACGATTCAACTCACCAACCAGCAATTACGCTTCAATGCTTGGCAGTGAGCCTGGCTCACTAACAAATGCATTTGATACCACATCTGGGATTTTCGGTGAGATGATATACGCTAGGGTGTTTGGTAATCAAGTGACAAACGTTTATGCTTACCCAGATTCATATCGTCTTGCCGGGAACAATAATCCAAGGATCAGAAGGCAGTTGATGCAAGCTAATAAGTCACTCAGCAGAATCTGTTCTTTCCTGCTATGTTGCGTAGTTTTGTGTCTTCTCCTATTCTG 746 0.4491 MLGSEPGSLTNAFDTTSGIFGEMIYARVFGNQVTNVYAYPDSYRLAGNNNPRIRRQLMQANKSLSRICSFLLCCVVLCLLLF 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00610 82 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RMA1 8 82 - -
Bva09g00610 82 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 8 82 IPR045103 GO:0005783|GO:0006511|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00610 Bva-Chr9 3216383 3219034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00610 14 82 C3H Transcription Factor Family AT4G28270 43.478 2.85e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00610 K10666 - jre:109020427 102.449