Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00592 ATGGGATCAGGAGAAACTTATGCAGCAACACAGACGGAGGAGACTTTAACCTTACAAGGCCAAGCTGATATATGGAAGTTGATTTACACCTATGGAGATTCCATGGCCCTGAAATCTGCTGTGGAGCTTCGTATACCCGATATCATACGCCGTCACGGTGGGCCACTCAGCTTAACCCAAATTTTGGCCGGTATTTCTGATGCACCATCTCCAGACATCACGTGCCTCGCACGCATCATGAGGGTGCTAGTCCGGAACAAGATCTTCAGCGCACAAGAGGCATCAGACGGCGGAGACACACTCTACGGGTTGACACACTCTTCAAGATGGCTCTTGACTGAGTCCGGGTCGGAGCCGAGCCTGGCCCCGTTGGTTGTGATGGAGAACCACCCCTTGAGGATGGCGTCGTGGCATTATCTGAGCCAATGCGTCAGGGAAGGTGGGTCTGCCTTCGTAAAAGCTCACGGGCGAGACGTTTGGGAGTTTGGATTGGAGAACCCAGAATTCAACAAGCGCTTCAACGAAGGGATGGCGTGTACGGCCAAGACTGTGATGAGCGGGGTCATCTCAGGTTATAAAGATGGGTTTGACAGCATTGGGTCAGTGGTGGATGTCGGGGGCGGAACCGGCCAAACGATATCTGAGATCGTGAAATCCTATCCGCACATCAAGGGCATAAACTTTGATCTGCCGCATGTTGTTGCGGCAGCGCCTAAATACGAGGGAGTCACTCACATCGGAGGCGATATGTTCCAGGAAATTCCTCATGCGGATGCGGTTTTCATGAAGTGGGTACTGCATGACTGGAGCGACGAAGACTGCGTCAAGATTTTGAACAAGTGCAAGAAAGCAATACCAGAGGGGAGAGGAAAAGTTATCATTGCGGAGATTGTTCTAAAGCCAGAGGGCCAAGGTTTTTTCGACTACACTGGTTTGCTCGTTGATTTGGCTATGCTTGCTACCTGCAACGGCGGAAGGGAGAGGACTGAGCCAGAGTGGAAGAAGCTATTACAAGAAGCAGGGTTTCCTCGTTCTAACATCATCACCGTCAATGCTTTGACATCAGTCATTGAGGCCTACCCTATTTG 1088 0.511 MGSGETYAATQTEETLTLQGQADIWKLIYTYGDSMALKSAVELRIPDIIRRHGGPLSLTQILAGISDAPSPDITCLARIMRVLVRNKIFSAQEASDGGDTLYGLTHSSRWLLTESGSEPSLAPLVVMENHPLRMASWHYLSQCVREGGSAFVKAHGRDVWEFGLENPEFNKRFNEGMACTAKTVMSGVISGYKDGFDSIGSVVDVGGGTGQTISEIVKSYPHIKGINFDLPHVVAAAPKYEGVTHIGGDMFQEIPHADAVFMKWVLHDWSDEDCVKILNKCKKAIPEGRGKVIIAEIVLKPEGQGFFDYTGLLVDLAMLATCNGGRERTEPEWKKLLQEAGFPRSNIITVNALTSVIEAYPI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00592 362 CDD AdoMet_MTases 202 294 - -
Bva09g00592 362 Pfam Dimerisation domain 35 84 IPR012967 GO:0046983
Bva09g00592 362 PANTHER (R,S)-RETICULINE 7-O-METHYLTRANSFERASE-LIKE ISOFORM X1 16 361 - -
Bva09g00592 362 Gene3D - 6 111 IPR036388 -
Bva09g00592 362 Gene3D Vaccinia Virus protein VP39 115 362 IPR029063 -
Bva09g00592 362 PANTHER O-METHYLTRANSFERASE 16 361 IPR016461 GO:0008168
Bva09g00592 362 SUPERFAMILY "Winged helix" DNA-binding domain 16 115 IPR036390 -
Bva09g00592 362 Pfam O-methyltransferase domain 137 342 IPR001077 GO:0008171
Bva09g00592 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 361 IPR016461 GO:0008168
Bva09g00592 362 PIRSF O-mtase 3 362 IPR016461 GO:0008168
Bva09g00592 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 360 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00592 Bva-Chr9 3143648 3145120 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00592 35 342 Monolignol Biosynthesis Gene Families AT5G54160 41.026 6.33e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00592 K22588 - qsu:111998567 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00592 09 3143648 3145120 Bva09g00592 09 3143648 3145120 ECH