Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00590 ATGGAAGTTGATTTACAGCTATGCAGATTCCATGGCCCTGAAATCTTGGAGCTTCGTATACCCGATATCATACGCCGTCACGGTGGGCCAATCAGCTTAACCCAAATTTTGGCCGGTATTTCTGATGCACCATCTCCAGACATCACGTGCCTCGAACGCATCATGAGGGTGCTAGTCCGGAAGAAGATCTTCAGCGCACAAGAGGCATCAAACAGCGGAGACACACTCTACGGGTTGACACACTCTTCAAGATGGCTCTTGACTGAGTCCGGGTCGGAGCCGAGCCTGGCCCCGTTGGTTGTGATGGAGAACCATCCGGTGAGGATGGCGCCGTGGCATTATCTGAGCCAATGCGTCAGGGAAGGTGGGTCTGCCTTCGTAAAAGCTCACGGGCAAGACGTTTGGGAGTTTGGATTAGAGAACCCAGAATTCAACAAGCGCTTCAACGAAGGGATGGCGTGTACGGCCAAGACTGTGATGAGCGGGGTCATCTCAGGTTATAAAGATGGGTTCGACAACATTGGGTCAGTGGTGGATGTCGGGGGCGGAACCGGCCAAACGATATCTGAGATCGTGAAATCCTATCCGCACATCAAGGGCATAAACTTTGATCTCCCGCATGTTGTTGCGGCAGCGCCTAAATACGAGGGAGTCACTAACATCGGAGGCGATATGTTCCAGGAAATTCCTCAGGCTGATGCGGTTTTAATGAAGtggGTACTACATGACTGGAGTGACGAAGACTGCATCAAGATTTTGAACAAGTGCAAGAAAGCAATACCAGAGGGGAGAGGAAAAGTTATCATTGTGGAGATTGTTCTAAAGCCAGAGGGCCAAGGTATTTTCGACTACACTGGTTTGGTCGTTGATTTGAATATGCTTGCTACCTGCAACGGTGGAAGGGAGAGGACTGAGCCAGAGTGGAAGAAGCTATTACAAGAAGCAGGTTTTCCTCGTTATAACATCATCACCGTCAATGCTTTGCCATCAGTCATTGAGGCCTACCCTATTTG 1013 0.4975 MEVDLQLCRFHGPEILELRIPDIIRRHGGPISLTQILAGISDAPSPDITCLERIMRVLVRKKIFSAQEASNSGDTLYGLTHSSRWLLTESGSEPSLAPLVVMENHPVRMAPWHYLSQCVREGGSAFVKAHGQDVWEFGLENPEFNKRFNEGMACTAKTVMSGVISGYKDGFDNIGSVVDVGGGTGQTISEIVKSYPHIKGINFDLPHVVAAAPKYEGVTNIGGDMFQEIPQADAVLMKWVLHDWSDEDCIKILNKCKKAIPEGRGKVIIVEIVLKPEGQGIFDYTGLVVDLNMLATCNGGRERTEPEWKKLLQEAGFPRYNIITVNALPSVIEAYPI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00590 337 SUPERFAMILY "Winged helix" DNA-binding domain 15 90 IPR036390 -
Bva09g00590 337 Pfam Dimerisation domain 16 59 IPR012967 GO:0046983
Bva09g00590 337 Pfam O-methyltransferase domain 112 317 IPR001077 GO:0008171
Bva09g00590 337 PIRSF O-mtase 14 337 IPR016461 GO:0008168
Bva09g00590 337 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 336 IPR016461 GO:0008168
Bva09g00590 337 Gene3D Vaccinia Virus protein VP39 90 337 IPR029063 -
Bva09g00590 337 Gene3D - 14 86 IPR036388 -
Bva09g00590 337 PANTHER O-METHYLTRANSFERASE 16 336 IPR016461 GO:0008168
Bva09g00590 337 PANTHER (R,S)-RETICULINE 7-O-METHYLTRANSFERASE-LIKE ISOFORM X1 16 336 - -
Bva09g00590 337 CDD AdoMet_MTases 177 274 - -
Bva09g00590 337 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 93 335 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00590 Bva-Chr9 3139052 3140264 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00590 16 323 Monolignol Biosynthesis Gene Families AT5G54160 38.782 2.15e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00590 K22588 - qsu:111998567 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00590 09 3139052 3140264 Bva09g00590 09 3139052 3140264 ECH