Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00587 ATGGGTTGCTGTGTCTCAACTAGCAGTAAGAGTACTTGTAGCAGCGGGAGCAATGGTGAGGCATTGCCTCCACCGTGTTTGGGGATCGGATTCCGCGGGCAAAAGAGTTCAAGGAAAACATTCTCAGATCACGTTATTTCCCTGCACCATTTACCATCCTTACCAAACAGAATTTTCAGTAATGGAAAGAGCAGGAGTTCTTGCATATTTACGCAGCAGGGTCGAAAGGGTATCAACCAAGATGCCATGATTGTTTGGGAAGATTTCCTGTCAGAAGATGTGATATTTTGCGGTGTCTTTGATGGCCATGGTCCTCATGGTCATCTTGTTGCGCGTAAAGTGAGGGATGCTTTGCCTGTAAAATTGCTTTCGTTTTTGCATTCTGGTGAATCGAGGCGAAATGGGTCTGGTAAAGCTTGCTTCACAGGGAACGTAAAGTCTTCCGATGGTGGAGAATTGGAGAAGGATTGTTCTGCCGAGGATAAACTCAACTCTATATGGAGAGAATCTTTCATGAAGGCATACAAGGCTATGGACAAAGAGCTTAAGTCTCATCCAAATTTGGACTGCTTCTGTAGCGGAAGCACTGCTGTCACTATGGTGAAGCAGgGTTCAAATCTGTTTATGAGCAATATTGGGGATTCCCGAGCAATAATGGGATCCAAAGACAGTAATGATTCCATGGTGGCAATTCAGTTAACTGTTGATTTGAAGCCAGATTTGCCAAgggaagcagaaagaattaaaCGTTGCAAAGGCAGGGTATTTGCTTTGCAAGATGAGCCTGAAGTGCATAGGGTATGGTTGCCGTTCGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGAGATTTCTGCCTCAAGGAGTATGGTGTGATTTCTATACCTGAATTCTCTCACCGTCTGCTCACAGACAAAGATCAGTTCATTGTACTTGCATCGGATGGGGTCTGGGATGTGTTAAGCAATGAGGAGGTGGTTGAAATAGTATCTTCAGCACCAACACGGTCATCGGCGGCAAGGATTCTGGTGGATTCTGCTGCCCGAGAATGGAAACTGAAATATCCAACTTCAAAGATGGATGACTGTGCTGTTGTGTGCCTATTTTTGGACGGCAAAATGGACTCGGAGTCCGATAACGATGAACAATGCTTCTCTTCTGCTACAATCCAGAGCAACCATTCGGGTAATCCTATTGAGTCAGACGATGGTCAAAAGTCGGAGCCATCTCTGCGGAGGAACTTCACTGTGAGATCATCAGAAGAAAATGAGGCTTATGGAGGACTAACGGTTGATACTGAAGATGGAACGTCATCCGCTGATGATCAAAACTGGTCAGGTTTAGAAGGTGTCACCCGTGTAAACTCGCTTGTCCAACTTCCTAGATTTTCCGAGGAAAGGCCAAACccttg 1415 0.4466 MGCCVSTSSKSTCSSGSNGEALPPPCLGIGFRGQKSSRKTFSDHVISLHHLPSLPNRIFSNGKSRSSCIFTQQGRKGINQDAMIVWEDFLSEDVIFCGVFDGHGPHGHLVARKVRDALPVKLLSFLHSGESRRNGSGKACFTGNVKSSDGGELEKDCSAEDKLNSIWRESFMKAYKAMDKELKSHPNLDCFCSGSTAVTMVKQGSNLFMSNIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVHRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDKDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDNDEQCFSSATIQSNHSGNPIESDDGQKSEPSLRRNFTVRSSEENEAYGGLTVDTEDGTSSADDQNWSGLEGVTRVNSLVQLPRFSEERPNP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00587 471 MobiDBLite consensus disorder prediction 390 405 - -
Bva09g00587 471 MobiDBLite consensus disorder prediction 433 451 - -
Bva09g00587 471 SUPERFAMILY PP2C-like 57 373 IPR036457 -
Bva09g00587 471 Pfam Protein phosphatase 2C 136 348 IPR001932 -
Bva09g00587 471 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 459 - -
Bva09g00587 471 ProSiteProfiles PPM-type phosphatase domain profile. 66 371 IPR001932 -
Bva09g00587 471 CDD PP2Cc 65 371 IPR001932 -
Bva09g00587 471 Gene3D - 57 373 IPR036457 -
Bva09g00587 471 SMART PP2C_4 55 369 IPR001932 -
Bva09g00587 471 MobiDBLite consensus disorder prediction 390 451 - -
Bva09g00587 471 MobiDBLite consensus disorder prediction 406 420 - -
Bva09g00587 471 PANTHER ALPHABET, ISOFORM E-RELATED 1 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00587 Bva-Chr9 3117921 3122161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00587 1 469 PP2C-type Phosphatase Gene Family AT1G03590 69.958 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00587 - - gmx:100798340 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00587 09 3117921 3122161 Bva07g02042 07 17625647 17629594 BWGD
Bva09g00587 09 3117921 3122161 Bva09g00587 09 3117921 3122161 ECH