Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00555 ATGGAGTTTGACCTGGAAAACCCTTTAGAAAACTTCCAAGAGCATAACTTTGACGCTATCTCTTTTCTGTTTCTCATTGAATCTGACCACATCCCATCGCAAAGCTATCTTCAGAGCCTCAAAGCCATGGACTTTGACATCACTGTAAGAACAGAAGTCATTTCTCTAATCTCACAGTTCTCATGCGCCTTCGATCAAATCCTCTCGTATCTTGCTATCAACTATCTAGATCGGTTCCTGGCCAACCAAGGAATACTGCAACCAAAGCCGTGGGCACTCAGGCTCCTTGCAGTCTCTTGCTTTTCTCTAGCTGCTAAGATGATGAAAACAGAGTTCTCAGTCAATCATGTTCAGAGCGATGGTGGTATGATTTTTGAGGCACAAACAATTCAGAGAATGGAAGCTCTTATCTTGGGAGCTTTACAATGGAGAATGCGTTCGATCACCCCCTTCTCTTTCATTCCTTTCTTCATCAATATGTTCAAGCTCAAAGACCCACCATTGAGGCTGGTTCTGAAAAATCGAGCCACTGAGATTATATTCAAATCCCAGAGagAGATAAAGCTTCTGGAATTCAAGCCATCTGTAATTGCTGCATCAGCCCTCCTCTGTGCTTCTCATGAGTTGCTTCCTTTTCAATATCCAAGCTTTTTAAGAGCAATATCAGACTGTTCTTCTGTAAATAAAgAAAGCATATTGCTGTGCTATAATGAGATTCAAGACTTAGCCATGGAAGGGTACGAGTCAGTGTTCGATATGGTTTCTAGTTCAGAGTCAGACACACCGGTTAACGTGTTAGACCATCATTTTCTGAGCTCGGAAAGTGAAAAAACCAACGGAACCACCACTGCTGCAACTGCTCTGAGACAAGAGAAGGACCcgaagagaaggaaaattagTGATTATGGCAACAACTGCACGGTTCAGATTTCTCAGACTCAACAATGCTG 950 0.4168 MEFDLENPLENFQEHNFDAISFLFLIESDHIPSQSYLQSLKAMDFDITVRTEVISLISQFSCAFDQILSYLAINYLDRFLANQGILQPKPWALRLLAVSCFSLAAKMMKTEFSVNHVQSDGGMIFEAQTIQRMEALILGALQWRMRSITPFSFIPFFINMFKLKDPPLRLVLKNRATEIIFKSQREIKLLEFKPSVIAASALLCASHELLPFQYPSFLRAISDCSSVNKESILLCYNEIQDLAMEGYESVFDMVSSSESDTPVNVLDHHFLSSESEKTNGTTTAATALRQEKDPKRRKISDYGNNCTVQISQTQQC 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00555 316 PANTHER CYCLINS 5 301 IPR039361 -
Bva09g00555 316 MobiDBLite consensus disorder prediction 275 297 - -
Bva09g00555 316 SUPERFAMILY Cyclin-like 12 145 IPR036915 -
Bva09g00555 316 Pfam Cyclin, N-terminal domain 20 145 IPR006671 -
Bva09g00555 316 SMART Cyclin_C_2 148 263 IPR004367 -
Bva09g00555 316 Gene3D - 33 146 - -
Bva09g00555 316 Gene3D - 25 239 - -
Bva09g00555 316 SUPERFAMILY Cyclin-like 130 258 IPR036915 -
Bva09g00555 316 SMART cyclin_7 152 241 IPR013763 -
Bva09g00555 316 SMART cyclin_7 55 139 IPR013763 -
Bva09g00555 316 CDD CYCLIN 50 138 IPR013763 -
Bva09g00555 316 PANTHER CYCLIN-D6-1-RELATED 5 301 - -
Bva09g00555 316 Pfam Cyclin, C-terminal domain 148 244 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00555 Bva-Chr9 2960192 2962280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00555 1 300 Core Cell Cycle Gene Families AT4G03270 44.872 1.06e-77 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00555 K18812 - gmx:100799951 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00555 09 2960192 2962280 Bva07g02083 07 17795158 17797262 BWGD
Bva09g00555 09 2960192 2962280 Bva09g00555 09 2960192 2962280 ECH