Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00549 ATGGACAACATGAAGAAACCATGGTTCTGGCTTTCTGTTCTCATCCTTTGCTTCTCGCTTCACACCAATCTCTCCCTTGGAGCTGACAGGATCACAGCAAATCAATCTCTTTCTGGTAATCAAACTATTGTCTCCGCCGGTGGGGTCTTCAAACTGGGTTTCTTCAACACAGGTAACTCCTCAAACTTTTACATAGGCATGTGGTATAATCAGGTCTCTGAACAGACCATTGTTTGGGTAGCAAACAGAGATACACCAGTCTCTGATACAAATTCTGCAAAGTTAACAATATCGGGTGGTAATTTAGTTCTTTTCAACGAGTCTCAAATGCCTATTTGGACAACAAATTTGAGTTCTACAAGTTCAAGTTCCGTAGAAGCTGTCCTTCTAGACACTGGGAATCTGGTCTTAAGACAAGGTACTGGATCGGATTATTTCTGGCAGAGTTTCGATAATCCAACAAATACATGGCTTCCAGGGGGTAAAATTAAGCTcgacaataaaacaaaacagccCCAATATCTTACTTCGTGGAAGAACAGCGAGAATCCTGCACCGGGCCTCTTCTCTCTGGAACTGGACCCAAAGGGAACCACTTCATATCTCATCCTTTGGAACAAATCTGAACAGTATTGGACCAGTGGTACTTGGAATGGCCAAATTTTCAGCTTGGTCCCTGAAATGAGGGCTAATTATCTGTACAATTTCACTTTTGAATCGAACGAGAATGAGAGTTATTTCACCTACTCCATGTATAATACATCTATCATATCTCGATTTGTGATGGACATCTCGGGGCAGATCAAGCAATTAACATGGTTGGAACCCTCTAAACAATGGACTCTGTTTTGGTCACAGCCAAGACGACAATGCGAGGTTTATGGTTTCTGTGGGTCATTTGGCAGCTGCACTGAGAATTCCATGCCATTCTGCAATTGTTTGACTGGTTTTGAGCCAAAGTCACAGAAAGACTGGAACTTGAATGACTTCTCAGGTGGTTGTCAGAGGAAAACGCAGTTGCAGTGTGAGAGTTCTAGCCCCTCTAATGGGAAGAGTGATAGGTTTATGGCAATACCCAACATGCAATTGCCTAAACATTCACAATCTGTAGGAGTTGGGAATGCAGGGGAATGTGAGACAACCTGTTTGAATAATTGCTCGTGCGCTGCTTATGCATATGACAGCAATGGCTGCTCAATATGGAACGGAGATCTCTTAAATCTGCAACAACTTTCCCAAGATGATAGCAGCGGAGAAACTCTGTATCTCAAACTGGCAGCTTCCGAGTTTTCtgaatctaaaaataaaaaggggatGGTTATTGGTATTGCTGCGGGTGCAGCTGGTGCTATAGGGGTTCTCGTTgccatttttgtgtttctgATGCTCAGgaggagaaagagaataatAGGAACAGGCAGATCAGTGGAGGGTACCTTAATGGCATTTGGGTACAGGGATTTGCAAAATGCAACCAAGAATTTCTCAGAGAAATTGGGCGGAGGAGGTTTTGGTTCTGTTTTCAAAGGAACCTTGCCAGATTCAAGTGTTATAGGAGTGAAGAAGCTTGAAAGCATCAGCCAAGGAGAGAAGCAGTTCAGAACAGAAGTAACTACAATTGGCACAGTCCAACATGTTAATCTTGTTCGACTTCGTGGATTCTGCGCTGAAGCTGACAGAAAGCTGCTTGTCTATGATTACATGCCAAATAGCTCTTTAGATTCCCATTTATTTCATGAAAGGAACTCCAACGCATTGGATTGGAAATTAAGATACCAAATTGCTCTGGGAACAGCCAGGGGATTGACTTATCTCCACGAGAAGTGCAGAGATTGTATCGTACACTGTGACATAAAGCCAGAGAACATTCTTTTAGATGCTGATTTTTGTCCTAAAGTGGCAGACTTTGGTCTGGCAAAGCTAATTGGAAGGGATTTCAGCAGGGTCCTCACAACCATGAGAGGAACGAGAGGCTATCTTGCCCCAGAGTGGATTTCTGGGGTAGCTATCACTGCCAAAGCTGATGTTTACAGCTATGGAATGATGCTTTTTGAATTTGTATCAGGAAGGAGAAACTCTGAGCCATCTGAAGATGGCCAAACTAAGTTCTTTCCCACATGGGCAGCAAACGTAGTAACCCAAGGAGGTGATGTTCTTAGCTTGTTAGACCCAAGGTTGAATGGAAATGCTGACATTGAGGAGCTTATTCGAATAATCAAAGTTGCTTCATGGTGTGTTCAAGATGATGAATCTCACAGGCCAACAATGGGTCAGGTAGTTCAAATACTTGAAGGTGTCTTGGATGTGAATTTGCCTCCAGTTCCAAGATCCCTCCAACTGTTTGTCGAAAACCAGGAGAACATAGTTTTCTTCACAGATTCAAGCTCAACCCAGATTTCACAGGCAAGAAGCAACGTATCAACAACCTCCTCTCAAGCTCAGTCTCAGTCTCAAGCCAGAAGCAACATTTCTTCATCAAGTTCCAAGTCTTTATCAGAGAACTA 2504 0.4189 MDNMKKPWFWLSVLILCFSLHTNLSLGADRITANQSLSGNQTIVSAGGVFKLGFFNTGNSSNFYIGMWYNQVSEQTIVWVANRDTPVSDTNSAKLTISGGNLVLFNESQMPIWTTNLSSTSSSSVEAVLLDTGNLVLRQGTGSDYFWQSFDNPTNTWLPGGKIKLDNKTKQPQYLTSWKNSENPAPGLFSLELDPKGTTSYLILWNKSEQYWTSGTWNGQIFSLVPEMRANYLYNFTFESNENESYFTYSMYNTSIISRFVMDISGQIKQLTWLEPSKQWTLFWSQPRRQCEVYGFCGSFGSCTENSMPFCNCLTGFEPKSQKDWNLNDFSGGCQRKTQLQCESSSPSNGKSDRFMAIPNMQLPKHSQSVGVGNAGECETTCLNNCSCAAYAYDSNGCSIWNGDLLNLQQLSQDDSSGETLYLKLAASEFSESKNKKGMVIGIAAGAAGAIGVLVAIFVFLMLRRRKRIIGTGRSVEGTLMAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLPDSSVIGVKKLESISQGEKQFRTEVTTIGTVQHVNLVRLRGFCAEADRKLLVYDYMPNSSLDSHLFHERNSNALDWKLRYQIALGTARGLTYLHEKCRDCIVHCDIKPENILLDADFCPKVADFGLAKLIGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEPSEDGQTKFFPTWAANVVTQGGDVLSLLDPRLNGNADIEELIRIIKVASWCVQDDESHRPTMGQVVQILEGVLDVNLPPVPRSLQLFVENQENIVFFTDSSSTQISQARSNVSTTSSQAQSQSQARSNISSSSSKSLSEN 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00549 834 ProSiteProfiles Protein kinase domain profile. 493 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00549 834 CDD PAN_AP_plant 338 426 - -
Bva09g00549 834 CDD B_lectin 34 153 IPR001480 -
Bva09g00549 834 Gene3D - 24 150 IPR036426 -
Bva09g00549 834 CDD STKc_IRAK 499 765 - -
Bva09g00549 834 Gene3D Phosphorylase Kinase; domain 1 460 567 - -
Bva09g00549 834 SMART serkin_6 493 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00549 834 Pfam Protein kinase domain 496 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00549 834 Pfam D-mannose binding lectin 76 179 IPR001480 -
Bva09g00549 834 Pfam PAN-like domain 350 407 IPR003609 -
Bva09g00549 834 SUPERFAMILY Protein kinase-like (PK-like) 479 796 IPR011009 -
Bva09g00549 834 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 7 793 - -
Bva09g00549 834 SUPERFAMILY Hairpin loop containing domain-like 352 411 - -
Bva09g00549 834 SMART ntp_6 350 425 IPR003609 -
Bva09g00549 834 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 7 793 - -
Bva09g00549 834 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 218 IPR036426 -
Bva09g00549 834 MobiDBLite consensus disorder prediction 801 834 - -
Bva09g00549 834 SMART blect_4 34 153 IPR001480 -
Bva09g00549 834 ProSiteProfiles PAN/Apple domain profile. 342 426 IPR003609 -
Bva09g00549 834 PIRSF SRK 2 818 IPR024171 GO:0004674
Bva09g00549 834 ProSiteProfiles Bulb-type lectin domain profile. 28 150 IPR001480 -
Bva09g00549 834 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Bva09g00549 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Bva09g00549 834 Gene3D Transferase(Phosphotransferase) domain 1 568 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00549 Bva-Chr9 2916264 2919020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00549 451 773 Receptor kinase-like Gene Family AT5G20050 42.179 2.21e-79 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva09g00549 Pkinase 3.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00549 - - gmx:100305421 1250.73