Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00536 ATGCAAAGCGCGACTTGCATGCACAAATCAGAGAGAGCCCGGGATGGATCAAAATCCCTGGCTGAGACATTGGAAAGATGGAAGGAGTATAATGCTCGGCTTGAATCTGGCAATGATGGGGATAAGCCAATTCGCAAAGTTCCTGCCAAGGGATCAAAGAAGGGATGCATGAAAGGCAAAGGAGGGCCTGAGAATTCACGTTGTAACTACAGAGGTGTTAGGCAAAGGACTTGGGGCAAGTGGGTTGCAGAAATTCGGGAGCCAAACCGGGGGAATAGACTTTGGTTGGGTACATTTGCAACTGCAATTGCAGCTGCTCTTGCCTATGATGAGGCAGCGAGGGCCATGTATGGTTCATGTGCCCGCCTTAACTTTCCTAATATTTCAGTCTCCAATTTCTCTAAAGAATCTTCAAAACAGTCTCCAGTTGCAAATCAGTCCGGTTCTGAAATAGCAACATCAGGACATTCTGAGTCCATGGTAACACCAAACAACTCTGGGTGTTGTGGAGCTGAGAATATTGACATGAAGCAAGTTTCTTCAAATGTAAAGCATGAGGAAGGGGAAGGTGAATCGAGTATCAGCTCCTCTCCTACTTCATCATG 605 0.4645 MQSATCMHKSERARDGSKSLAETLERWKEYNARLESGNDGDKPIRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFATAIAAALAYDEAARAMYGSCARLNFPNISVSNFSKESSKQSPVANQSGSEIATSGHSESMVTPNNSGCCGAENIDMKQVSSNVKHEEGEGESSISSSPTSS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00536 201 MobiDBLite consensus disorder prediction 136 201 - -
Bva09g00536 201 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 7 194 - -
Bva09g00536 201 CDD AP2 68 127 IPR001471 GO:0003700|GO:0006355
Bva09g00536 201 Gene3D AP2/ERF domain 69 128 IPR036955 GO:0003700|GO:0006355
Bva09g00536 201 ProSiteProfiles AP2/ERF domain profile. 69 126 IPR001471 GO:0003700|GO:0006355
Bva09g00536 201 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Bva09g00536 201 PRINTS Ethylene responsive element binding protein signature 92 108 IPR001471 GO:0003700|GO:0006355
Bva09g00536 201 Pfam AP2 domain 68 118 IPR001471 GO:0003700|GO:0006355
Bva09g00536 201 SUPERFAMILY DNA-binding domain 69 126 IPR016177 GO:0003677
Bva09g00536 201 SMART rav1_2 69 132 IPR001471 GO:0003700|GO:0006355
Bva09g00536 201 MobiDBLite consensus disorder prediction 136 178 - -
Bva09g00536 201 MobiDBLite consensus disorder prediction 34 68 - -
Bva09g00536 201 MobiDBLite consensus disorder prediction 34 48 - -
Bva09g00536 201 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 7 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00536 Bva-Chr9 2867843 2869990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00536 1 181 AP2-EREBP Transcription Factor Family AT2G40340 47.368 1.34e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva09g00536 AP2 5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00536 - K09286 gmx:100527471 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00536 09 2867843 2869990 Bva07g02102 07 17899739 17902225 BWGD