Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00531 ATGAAAGCTGAGTTAAAGGGAAGCACTACGTCCATCTCTCTGCAAAAcactattttgtttaataaatctCATAATCCTCTTTCGGGGGCACTCAAAGGGTGCCTTGGAAGCCTCGATGGAGCTTGTATTGAGAAACTCTTACTTCACTGTGCTAGTGCTTTAGAGAGCAACGACGTCACTTTGGCTCAACAAGTCATGTGGGTGCTCAACAACGTCGCTTCCCCTGTCGGTGACACTAACCAAAGGCTCACCTCGTGGTTCCTGAGGGCATTAATTTCTAGAGCCTCGAGAATTTGCCCTGCAGCCATGAATTTCAATGGAAGCAGCACCATTCAGAGGAGGTTGATGTCTGTGACCGAGCTAGCTGGGTATGTTGATCTGATTCCTTGGCATAGGTTTGGATTCTCTGCATCAAATAGTGCAATTTTTAAAGCAATTGAAGGATTCCAAAAGGttcatattttagattttagcaTAACTCACTGTATGCAGTGGCCTACCCTCATAGATGTCTTGGCTAAAAGAGCTGAAGGACCCCCTTCACTTAAAATCACCGTGCCTTCTTGTAGACCACCTCTCCCTCCGTTGGTTAATGTATCAACAGAAGAGGTTGGCCTACGTTTGGGGAATTTCGCAAAGTTTAAGGATGTTCCTTTTGAGTTCAATGTGATTGGCAATAGTACAGCTTCATCAACATCTGCTGAATCAAGTAATGAATTGTCTAGCTTTCACTTTGAAGTAGAATCTCTGTTAAGTCAATTGAATCCTTCTTTGTTAAACCTCATGGAAGACGAAGCTTTAGTAATAAATTGCCAGAATTGGCTACGCTTCTTGTCTGATGATCGAAAGGGAGTGCGCCGAAATGCTTCTCTTCGTGACACTTTTCTAAATCTAATTAGAGGTTTGAACCCCAGGATTGTGCTATTGGTTGATGAGGATTGTGATCTTAGTGCACCAAGTCTCACCTCAAGAATAACCACTTGCTTTAACTATCTATGGATACCCTTTGATGCATTGGAGACCTTTTTGCCTAAAGATAGTTGCCAGAGGGTGGAATATGAATCTGACATAGGCCAGAAAATTGAGAACATCATTAGCTTTGAAGGGCTTCAAAGAATAGAGAGATTAGAATCTGGCACACAAATGTcacaaagaatgaaaaatgctGGTTTCTTCAGTGTTCCATTTTGTGAAGATACTTTAAGGGAGGTTAAGGGTTTGCTTGATGAGCATGCTAGTGGATGGGgaatgaagagagaagaagatatGTTAGTTCTCACTTGGAAGGGTCACAACTGTGTCTTTGCCAACGCATGGGTCCCCAGTGAAATGAAGGATCGTATGGGCGTGGAGTCTGTGGACTG 1364 0.4106 MKAELKGSTTSISLQNTILFNKSHNPLSGALKGCLGSLDGACIEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDTNQRLTSWFLRALISRASRICPAAMNFNGSSTIQRRLMSVTELAGYVDLIPWHRFGFSASNSAIFKAIEGFQKVHILDFSITHCMQWPTLIDVLAKRAEGPPSLKITVPSCRPPLPPLVNVSTEEVGLRLGNFAKFKDVPFEFNVIGNSTASSTSAESSNELSSFHFEVESLLSQLNPSLLNLMEDEALVINCQNWLRFLSDDRKGVRRNASLRDTFLNLIRGLNPRIVLLVDEDCDLSAPSLTSRITTCFNYLWIPFDALETFLPKDSCQRVEYESDIGQKIENIISFEGLQRIERLESGTQMSQRMKNAGFFSVPFCEDTLREVKGLLDEHASGWGMKREEDMLVLTWKGHNCVFANAWVPSEMKDRMGVESVD 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00531 454 Pfam GRAS domain family 44 439 IPR005202 -
Bva09g00531 454 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 441 IPR005202 -
Bva09g00531 454 ProSiteProfiles GRAS family profile. 34 440 IPR005202 -
Bva09g00531 454 PANTHER OS05G0500600 PROTEIN 2 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00531 Bva-Chr9 2830472 2831836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00531 14 441 GRAS Transcription Factor Family AT3G49950 45.872 3.20e-126 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva09g00531 GRAS 8.8e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00531 - - gmx:100805056 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00531 09 2830472 2831836 Bva09g00531 09 2830472 2831836 ECH