Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00528 atgaaggagaaaaatttTGAGTCCAGTAATAGTGAGGCCTCTGGATTTTCATTCTCGGCCGGCAACACTTGTCATTCGTTGGATTCCATGGTTCCCGGCACGAGCCTTCAGTCACTACTTACCTTCAACTCATCTCTTTTAGCTGATTATCCCAGTCTGGCCTTCATAACAGACCACAGTTCTCATTCTCCCTCCCAGCTGGATGGGTATGAATGCGCCTCCAACACCAACAGTGAGAATCACAAGAACAAGCTCATTGTTCCCAAGAACGAACCTATTCTCATCCAAGACGGAGGCAGTGCTACTGCTACTCAATCCATGGACTTGTTCTCCAACTGCCCATCCCAACCCCACTCTCAACATTTCTACGACTCATTGACCACCTTCCAACGTCTCCCTCAACTCCATTCCTTCGAGATGAACCCACTCATCCCTGGCCCTGATTCATCCTTTGCTCAGAAGAGACCTCGCTTTGATTCTCTTAACTCGGTGGGCCACGATTCATATCTCCAATCTCCAATCCTCAACAACTTCTCCGCCGTGACGCAGAGACACAAGAGCAAGGGCAAGCCaccctcttcctcttcctctctaCTGGACACTCTTCCGCTTGAGCCGAAACCCCATCAGCTAATCCCTCAGAGCAACCTTGCTCGCCAGCGCCGGCAGAGGCTCAGTGACAAAACTCGGTGCCTGCAGAAGCTCATGCCTTGGGATAAGAAGATGGACCAGGCTACTCTGTTTGAGGAGGCCTACAAGTACGTCAAGTTCCTTCAGGCTCAATTGTATGCTCTCCAGTCCATGCCCTCCGTCTCCGACTCTACACTGCTACTTGCCCATAAACCCGGCAACACTGCAACTGGTGTTATATTTGGGGATTTGGAGAGGCTCACCCGCACCCAGGTCTTACAGGTGCTCGTCAATTCACCCGCAGCGCAAACCATGCTTTACGCCCAAGGTTTCTGCGTCTTCTCCATTGAACAGTTAACTTTGCTCAAGAATATCTCGGAGAGAAGGCTCCTTCTACAACAGATGATGCTTGATAATCCTTCTTCCAAAGCTTTCTTCAAGTA 1073 0.4856 MNPLIPGPDSSFAQKRPRFDSLNSVGHDSYLQSPILNNFSAVTQRHKSKGKPPSSSSSLLDTLPLEPKPHQLIPQSNLARQRRQRLSDKTRCLQKLMPWDKKMDQATLFEEAYKYVKFLQAQLYALQSMPSVSDSTLLLAHKPGNTATGVIFGDLERLTRTQVLQVLVNSPAAQTMLYAQGFCVFSIEQLTLLKNISERRLLLQQMMLDNPSSKAFFK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00528 218 MobiDBLite consensus disorder prediction 1 25 - -
Bva09g00528 218 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 69 129 IPR036638 GO:0046983
Bva09g00528 218 MobiDBLite consensus disorder prediction 43 62 - -
Bva09g00528 218 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 70 119 IPR011598 GO:0046983
Bva09g00528 218 SMART finulus 76 125 IPR011598 GO:0046983
Bva09g00528 218 Gene3D - 73 136 IPR036638 GO:0046983
Bva09g00528 218 MobiDBLite consensus disorder prediction 43 70 - -
Bva09g00528 218 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 52 208 IPR045843 GO:0003700|GO:0006355
Bva09g00528 218 PANTHER TRANSCRIPTION FACTOR BHLH117 52 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00528 Bva-Chr9 2808100 2809173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00528 82 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 47.863 1.32e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva09g00528 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00528 - - aprc:113855910 188.348