Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00517 ATGTGCAAAGGAGCAGAAGAGGGAAAGCATGGTAGCTTCTGCACGAGCTTCAAGGCTGAAGAGGTTGCTTCAAATAGCAGAGCCAGAGGCTCAGTGTCCTGCGAGCTGTGTGGGTTAAAGGCTTCATTGTATTGCCAAGCTGATGACGCATATTTATGTAGAAAATGTGACAGATGGGTTCACGAAGCAAATTTCTTGGCCCTTAGGCATATGAGGTGTTTTCTCTGCAAGACATGCCAAAACCTTACACAACGATATCTCGTTGGAGACTCAGCGGAGGTTTATCTCCCAACCATCTTAAGTTGGGTTGCAGGAAGCCAGCATAACAGCGGCGCCAGCAGAAAGTGTTCAAGAATGCAAAAAAGTCATTTCTTCTTTCGTTG 383 0.4621 MCKGAEEGKHGSFCTSFKAEEVASNSRARGSVSCELCGLKASLYCQADDAYLCRKCDRWVHEANFLALRHMRCFLCKTCQNLTQRYLVGDSAEVYLPTILSWVAGSQHNSGASRKCSRMQKSHFFFR 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00517 127 CDD Bbox1_BBX-like 34 75 - -
Bva09g00517 127 PANTHER B-BOX ZINC FINGER PROTEIN 29 19 102 - -
Bva09g00517 127 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 19 102 - -
Bva09g00517 127 SMART bboxneu5 29 75 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00517 Bva-Chr9 2738448 2738831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00517 26 101 C2C2-CO-like Transcription Factor Family AT3G21890 57.143 3.43e-25 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00517 - - gmx:100305571 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00517 09 2738448 2738831 Bva07g02120 07 17984047 17984412 BWGD
Bva09g00517 09 2738448 2738831 Bva09g00517 09 2738448 2738831 ECH