Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00512 ATGGAAGCCATTTGCCCAATTGATTCCCGCTGTGCCGATGAAATTTCTGCTCTTCTCAGTCCTCCCTCACATCTTCAAATTCAGGAATATTATGATAAGCTTTTATCTAAAAGGCAGTGCAGCGGTATTACAGTCAAACAAGATGGAAAGTTTGGAAAGGGTGTATATGCTGTCAAGGACTTCAAAGAAGAAGAGCTTGTTTTGAAAGACCCGATGTTGGTTGGGGTTCAACACTCTTCCAACAAGATTGACTGTTTTGTCTGTAGCTTCTGCTTTCGTTTTATTGGTTCCATAGAACATCAGATTGGACGGAGGCTTTACTTGCAAGAAATAGGACCTTCTGACAGACATGATTGTGATATGGAAATCTATTCAGACAAGTCAGGAATAGATTCATCTGATGGAGAAGACAATTCACATATGAAAAATGAGGAGACTCTTGAGGAATGTACTTCTGGTAGCTCCACAGCTAAAATTCCCCTCCCTGAAGGTGTTGCAGAGTCACTAATGAATGGCCGATTGACGTTGCCTTATTCTAAGGACTTTTCCTTGCCTCCAGCCGTTCCACGTCCTGGTGGGTGTGAAGAAGCTCACTACTGCAGCACCTCCTGTGCTGAGGCTGATTGGGAATCCTCTCATTCTTTACTTTGTACTGGTGAGAGGTCTGATCCAGGACATAAGGAGGCACTTCTAAAGTTCATCAAACATGCTAACGAAACAAATGATATATTCCTTCTTGCTGCAAAGGCTATTTCTTCCACCATATTAAGGTACCACAAACTAAAAGCAAACCATCTTGAAAAGCAACTGAAATATGATACAGCCAGTCTTCCGCATCACTGTGATCTCTCTCTGCTTATGGAGGCTTGGAGGCCAATATCAATGGGACATAAGAGAAGGTGGTGGGACTGCATTGCGCTGCCAGATGATATTGATTCTTCTGATGAAGCTGCATTCAGGTCACAAATAAGAGATCTGGCATTCAAGTCGCTCCAACTCCTTAAGACAGCTATATTTGACAAGGAGTTAGAGCCATTATTCTCTCTCGAAATTTATGGAAATATCATTGGCATGTTCGAGCTGAATAACCTAGATTTGGTTGTAGCTTCTCCCGTGGAGGATTACTTTTTATTCATTGATGATCTAGCACATCCCGAGAAGGAAGAAGctgagaaaattacaaaaccaATTCTGGATGCTCTTGGTGAAGACTATTCAGTTTGTTGCCAGGgaACTGCATTTTTCCCTTTGCAAAGCTGCATGAACCATTCTTGTTCTCCTAATGCCAAGGCGTTCAAAAGGGATGAGGATAGAGATGGCCAAGCAACAATAATTGCACTGAGATCCATTTGCAAAGGAGAAGAGATAACCATTTCATATATTGATGAGGAGCTTCCATATGAAGAGAGACAGGCATCCCTGGCAGATTACGGCTTCAGATGCAGGTGCCCAAAGTGCATTGAAGAAGAGCCATA 1475 0.4197 MEAICPIDSRCADEISALLSPPSHLQIQEYYDKLLSKRQCSGITVKQDGKFGKGVYAVKDFKEEELVLKDPMLVGVQHSSNKIDCFVCSFCFRFIGSIEHQIGRRLYLQEIGPSDRHDCDMEIYSDKSGIDSSDGEDNSHMKNEETLEECTSGSSTAKIPLPEGVAESLMNGRLTLPYSKDFSLPPAVPRPGGCEEAHYCSTSCAEADWESSHSLLCTGERSDPGHKEALLKFIKHANETNDIFLLAAKAISSTILRYHKLKANHLEKQLKYDTASLPHHCDLSLLMEAWRPISMGHKRRWWDCIALPDDIDSSDEAAFRSQIRDLAFKSLQLLKTAIFDKELEPLFSLEIYGNIIGMFELNNLDLVVASPVEDYFLFIDDLAHPEKEEAEKITKPILDALGEDYSVCCQGTAFFPLQSCMNHSCSPNAKAFKRDEDRDGQATIIALRSICKGEEITISYIDEELPYEERQASLADYGFRCRCPKCIEEEP 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00512 491 SMART set_7 41 467 IPR001214 GO:0005515
Bva09g00512 491 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 13 490 IPR044237 GO:0008168
Bva09g00512 491 ProSiteProfiles SET domain profile. 41 461 IPR001214 GO:0005515
Bva09g00512 491 Pfam MYND finger 192 217 IPR002893 -
Bva09g00512 491 Gene3D SET domain 382 490 IPR046341 -
Bva09g00512 491 SUPERFAMILY HIT/MYND zinc finger-like 193 218 - -
Bva09g00512 491 Pfam SET domain 52 460 IPR001214 GO:0005515
Bva09g00512 491 Gene3D - 182 219 - -
Bva09g00512 491 CDD SET_SMYD 409 486 - -
Bva09g00512 491 SUPERFAMILY SET domain 34 486 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva09g00512 SET 9.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00512 - - gmx:100803651 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00512 09 2711626 2717435 Bva09g00512 09 2711626 2717435 ECH