Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00511 ATGGTTGAGCACAAGCAGTTCAAGACGAAGTTATGTGTACCATATCAGAGAGGCCGCTGTACCCGCCAGAATTGCTCCTTTGCACATGGAAATGCGGAGCTGCGACGATTCTCTAGCTCATATAGTGgTAGGCGAGACTATTCAGGTAATGACTTGAGGGATAAACTTGACAGAAGGCACTTATCACCACGAAGGTACTCACCAGCCAGACATTCAAGAGGCCACAAGACTGTTCATGATTACCACCCTCCAAGCTCCTTTGAGGAAAAAAACGACAGAAAACATAGAACAACACAGGTTATTACTGGCCAAAGTGATGTTTCTGGAGGTTTGAAAGTCTCTGGCTCAAGAAACAGTCTCGAGGAGCAGTTAAAGAATGTACAGTTGGATATCAGCAAGCTTGAGAACCAAAAATTCCAACTAGGGgtCTACCTGAATGACAGTGCTCAAGAAGTGGATAGCCTTAATTCCAGAATTCAGGAACTTGAAGCTCAGTTGATCAACGAGAATGAGGAATGTAAAAGGATCACCTTGAAGATAAGGAAGTTTATCAAAGCACATAATCATAACTCACGGTTACAAGATGAACTGAAGAGATCGCAGGTCCGACTTCAAAGGTTGGGAGATGAGCTTGCATCAGACATTACTGGAATTGGCACCAATGAGGAAGATTTAAGCATTGATATTGTAAGCAATGGGGAAAATACAGGTTTTCCTCCAATCATCAAACGTAAAGTGGAGCATAATGAAGCTTCTCCACACAAAAAAAGGCTGCATGTTGAACGAGATGCTGTCGATGAGTCAAAACAAGATAAATCAAAAGCGGAGCATTTGGTTGAAACAGCCAAAACCAGGAAGCGTTCTCGTGGGAATGTAGCTGCTCCATTGAATGATAAGGGGTATTTGGGCCTTGAGGTCCCACGCACTGGAACTGAAGTGACTAGACCCACTGATCTTGAAGGCACACATAAGAGAGGAATATATAATTCTTCTAAAAATCTCTATCCTGAAAAGTTGAAGGAATCCAGACCTGAATTGCCATCCTCTAGCATGGTAGCTCACACGGTTGATGAAGACGTTGAGATTGAACTGGATGATAAAACCGAGATTCCCGAAACTGCACACCCAGAAAATGGGAATGGACCGGCATTCAAGGTGAAGGGAATGCCTCTCCTGCTTCCCCCAGTTCTAACTCTTGGTAACAATTATTCACAATATGAGGGTGATGATGATAATGTCGATATCGATGGGCTTGATGAAGATGTCACCGGGCGCACGTA 1280 0.4352 MVEHKQFKTKLCVPYQRGRCTRQNCSFAHGNAELRRFSSSYSGRRDYSGNDLRDKLDRRHLSPRRYSPARHSRGHKTVHDYHPPSSFEEKNDRKHRTTQVITGQSDVSGGLKVSGSRNSLEEQLKNVQLDISKLENQKFQLGVYLNDSAQEVDSLNSRIQELEAQLINENEECKRITLKIRKFIKAHNHNSRLQDELKRSQVRLQRLGDELASDITGIGTNEEDLSIDIVSNGENTGFPPIIKRKVEHNEASPHKKRLHVERDAVDESKQDKSKAEHLVETAKTRKRSRGNVAAPLNDKGYLGLEVPRTGTEVTRPTDLEGTHKRGIYNSSKNLYPEKLKESRPELPSSSMVAHTVDEDVEIELDDKTEIPETAHPENGNGPAFKVKGMPLLLPPVLTLGNNYSQYEGDDDNVDIDGLDEDVTGRT 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00511 426 Coils Coil 190 210 - -
Bva09g00511 426 MobiDBLite consensus disorder prediction 247 296 - -
Bva09g00511 426 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Bva09g00511 426 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 422 IPR045868 GO:0046872
Bva09g00511 426 MobiDBLite consensus disorder prediction 47 63 - -
Bva09g00511 426 Gene3D - 1 36 - -
Bva09g00511 426 Coils Coil 145 179 - -
Bva09g00511 426 MobiDBLite consensus disorder prediction 402 426 - -
Bva09g00511 426 MobiDBLite consensus disorder prediction 78 96 - -
Bva09g00511 426 MobiDBLite consensus disorder prediction 40 96 - -
Bva09g00511 426 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 422 - -
Bva09g00511 426 Coils Coil 265 285 - -
Bva09g00511 426 MobiDBLite consensus disorder prediction 247 287 - -
Bva09g00511 426 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00511 Bva-Chr9 2703582 2710792 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bva09g00511 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00511 - - aprc:113858008 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00511 09 2703582 2710792 Bva09g00511 09 2703582 2710792 ECH