Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00499 ATGCCAGCCGGGATTATGATTCCGGCGAGAAACATGCCCTCTATGATTGGAAGAAACGGCAGCTTTGGTGGCTATGGATCATCATCAGGCCTTTCTCTCGGACAGCCGAAGTTGCCGGATAGTCAGCTCCACTCGCTGGACATGGCCCAGAACACACCCGAGAGCGATGTCCCCAGAATCCGAGACGATGACTTGGACACTGCCACCAAGTCCGGCAGCGACAACCCTGAAGGTGTCTCCGGCGACGACCAAGACCCACGACCCAAGAAGAAGCGCTACCACCGCCATACCCAGCACCAGATCCAGGAAATGGAAGCATTCTTTAAGGAGTGTCCACACCCAGATGATAAGCAAAGGAAGGAGCTTAGCAGAGAATTAAGTTTAGAGCCTTTGCAAGTCAAGTTTTGGTTCCAAAACAAGCGTACCCAGATGAAGACCCAGCACGAGCGCCAAGAGAACACACAGCTTAGAACTGAAAATGAGAAGCTCAGAGCTGACAACATGAGATATAGAGAAGCTCTTAGCAATGCTTCATGCCCTAATTGTGGTGGACCAACTGCTATTGGAGAAATGTCCTTTGATGAGCATCACTTGAGGCTGGAAAATGCCCGCCTCAGAGAGGAGATTGATCGTATTTCGGCCATTGCAGCCAAGTATGTAGGCAAGCCAGTGATGAACTATCCACTGCCTTCGGTTCCTCCCCGCCCGCTAGAGCTTGGAGTCGGTGGTTTTGGTGGCCAGCATGCAGGGATGGGTGGTGGGGACATGTATGGTGCTGGAGATCTTCTGAGGTCAATCAGTGCACCTTCCGAAGCTGATAAACCAATGATAATCGAGCTTGCTGTTGCAGCTATGGAGGAACTCGTCAGAATGGCACAAATGGGTGAGCCCCTTTGGATGACCTCCCTAGATGGCTCTACCGCTGTGCTTAACGAAGAAGAATACATTAGATCATTTCCTCGAGGAATTGGTCCGAAACCCACTGGATTCAAATGTGAAGCTTCAAGAGAAACTGCTCTTGTTATCATGAATCACATTAACCTTGTTGAGATTCTCATGGATGTGAACCAATGGTCCACCGTGTTCTCTGGATTAGTCTCAAGAGCTATGACTCTAGAAGTACTGTCAACAGGAGTGGCTGGGAACTACAATGGTGCTTTGCAAGTGATGACGGCAGAGTTACAAGTACCTACGCCTCTTGTTCCAACTCGAGAGAGTTATTTTGTGAGGTACTGCAAACAGCACGGGGATGGGACATGGGCAGTGGTGGATGTGTCTTTGGATAATTTGAGGCCTAGTCCTTCCGAGAGATGTAGAAGAAGGCCTTCTGGTTGCTTAATCCAAGAGATGCCAAATGGTTACTCAAAGGTAACATGGGTTGAGCATGTAGAAGTGGATGACAGAGGTGTTCATAATTTGTACAAGCAGCTTGTAAGCTCCGGAAATGCATTTGGCGCAAAACGTTGGGTTGCAACCTTAGATAGACAATGTGAAAGGCTTGCTAGTGCTATGGCCACAAACATACCCACCGGTGAAATTGGGGTTATAACAAATCAAGAAGGCAGGAAGAGTATGATGAAGCTGGCTGAGAGAATGGTGATAAGCTTTTGTGCTGGAGTGAGTGCTTCTACAGCACATACGTGGACTACACTCTCTGGAACTGGTGCTGATGATGTTAGGGTCATGACCCGCAAGAGTGTAGATGACCCAGGAAGACCTCCTGGCATCGTTCTAAGTGCTGCTACTTCTTTTTGGCTTCCAGTTCCTCCGAAGAGTGTCTTCGATTTTCTCCGTGATGAGAACTCCAGAAGTGAGTGGGACATTCTTTCCAACGGTGGAGTTGTCCAAGAAATGGCGCATATAGCTAATGGCCGAGATACAGGAAATTGTGTGTCTCTACTTCGAGTGAATAGTGCCAATTCAAGCCAGAGCAACATGTTGATATTACAAGAGAGTTGCACCGACTCAACAGGCTCCTTTGTTATTTACGCTCCTGTAGATATTGTTGCCATGAACGTGGTTCTAAATGGAGGGGACCCAGACTATGTTGCCCTTCTCCCTTCTGGATTTGCCATTCTCCCAGATGGAACCACAGCACATGGAGCTGCCATTGGTGAAACCGGACATGGTGGATCTCTCTTGACTGTTGCTTTTCAAATTCTGGTTGATTCAGTTCCAACAGCAAAGCTCTCTCTTGGATCTGTTGCTACAGTCAATAATCTTATTGCGTGCACTGTTGAGAGAATCAAGGCTTCCTTGTCATGTGAAGCTGCTTG 2276 0.4811 MPAGIMIPARNMPSMIGRNGSFGGYGSSSGLSLGQPKLPDSQLHSLDMAQNTPESDVPRIRDDDLDTATKSGSDNPEGVSGDDQDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELSLEPLQVKFWFQNKRTQMKTQHERQENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVMNYPLPSVPPRPLELGVGGFGGQHAGMGGGDMYGAGDLLRSISAPSEADKPMIIELAVAAMEELVRMAQMGEPLWMTSLDGSTAVLNEEEYIRSFPRGIGPKPTGFKCEASRETALVIMNHINLVEILMDVNQWSTVFSGLVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPTPLVPTRESYFVRYCKQHGDGTWAVVDVSLDNLRPSPSERCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGNAFGAKRWVATLDRQCERLASAMATNIPTGEIGVITNQEGRKSMMKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKSVFDFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTTAHGAAIGETGHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEAA 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00499 758 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 45 755 - -
Bva09g00499 758 SUPERFAMILY Homeodomain-like 75 147 IPR009057 -
Bva09g00499 758 SUPERFAMILY Bet v1-like 518 750 - -
Bva09g00499 758 SMART START_1 279 499 IPR002913 GO:0008289
Bva09g00499 758 ProSitePatterns 'Homeobox' domain signature. 122 145 IPR017970 GO:0000981|GO:0006355
Bva09g00499 758 Pfam START domain 280 499 IPR002913 GO:0008289
Bva09g00499 758 SUPERFAMILY Bet v1-like 272 501 - -
Bva09g00499 758 Coils Coil 146 173 - -
Bva09g00499 758 CDD homeodomain 90 148 IPR001356 GO:0003677
Bva09g00499 758 ProSiteProfiles 'Homeobox' domain profile. 87 147 IPR001356 GO:0003677
Bva09g00499 758 MobiDBLite consensus disorder prediction 56 70 - -
Bva09g00499 758 SMART HOX_1 88 151 IPR001356 GO:0003677
Bva09g00499 758 Gene3D - 78 164 - -
Bva09g00499 758 Pfam Homeodomain 90 145 IPR001356 GO:0003677
Bva09g00499 758 MobiDBLite consensus disorder prediction 21 52 - -
Bva09g00499 758 CDD START_ArGLABRA2_like 274 498 - -
Bva09g00499 758 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 45 755 IPR042160 -
Bva09g00499 758 ProSiteProfiles START domain profile. 270 502 IPR002913 GO:0008289
Bva09g00499 758 MobiDBLite consensus disorder prediction 1 98 - -
Bva09g00499 758 Gene3D - 336 495 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00499 Bva-Chr9 2643224 2648206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00499 40 758 Homeobox Transcription Factor Family AT1G05230 79.696 0.0 1169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bva09g00499 START 4.6e-59 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00499 K09338 - gmx:100797992 1326.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00499 09 2643224 2648206 Bva09g00499 09 2643224 2648206 ECH