Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00494 ATGGCTGACATGGATCGCTCCTCAGATAATGTTTCTGCAGATTCTGCAGAGCAAACCAGCCAAGCATTTTCCAAGGCTGAATTttctgaagatgaagaaaccCTTATTACCAGGATGTATAATCTTGTTGGTGAGAGGTGGTCTTTAATTGCTGGAAGAATTCCTGGAAGAACAGCAGAGGAAATAGAGAAGTATTGGACTTCAAGATATTCCACTAGCGAATG 224 0.3839 MADMDRSSDNVSADSAEQTSQAFSKAEFSEDEETLITRMYNLVGERWSLIAGRIPGRTAEEIEKYWTSRYSTSE 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00494 74 SUPERFAMILY Homeodomain-like 25 70 IPR009057 -
Bva09g00494 74 Pfam Myb-like DNA-binding domain 27 67 IPR001005 -
Bva09g00494 74 MobiDBLite consensus disorder prediction 8 25 - -
Bva09g00494 74 PANTHER TRANSCRIPTION FACTOR TRY-LIKE 13 73 - -
Bva09g00494 74 SMART sant 24 72 IPR001005 -
Bva09g00494 74 CDD SANT 27 66 IPR001005 -
Bva09g00494 74 Gene3D - 27 69 - -
Bva09g00494 74 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 13 73 - -
Bva09g00494 74 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Bva09g00494 74 MobiDBLite consensus disorder prediction 1 29 - -
Bva09g00494 74 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 74 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00494 Bva-Chr9 2611807 2612355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00494 20 71 MYB Transcription Factor Family AT5G14750 46.154 1.49e-14 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva09g00494 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00494 - - dzi:111287942 124.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00494 09 2611807 2612355 Bva09g00494 09 2611807 2612355 ECH