Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00485 ATGCCGAGGAATACCCAGAATAACGTTAGAGATGAAGGTGGTGTGAGTCTGAGAAACGAAAACACAACAAACGAGGGTGGCAACAAAAAGGAAACGTTGAAAAAAGGGCCATGGACAACACAAGAGGATGCCATCTTAATGGAGTACGTGAAAAAATACGGTGAGGGGAACTGGAACTCCGTCCACAAGAACACGGGGTTGGCCAGGTGTGGGAAAAGTTGCAGACTCAGATGGGCTAATCATCTCAGGCCTAATCTCAAGAAAGGTGCATTTTCTGCTGACGAAGAAAAACTCATGATCGAACTTCACGCTAAGCTCGGAAATAAATGGGCTCGTATGGCCTCCCAGTTACCTGGGAGAACtgataatgaaataaagaacTTTTGGAACACCAGAATGAAAAGGCGCCAGAGAGCAGGCTTGTCTCTTTATCCTCAAGATGTGCAGGATGAAGCCGATGATGCGTACCGTGTTGAACAAAACCAGTCATTcacttcatctttttcttatccTTCAATCCCTTCCAACTCTTATGGGCAAAAGTTCAACCAATTGAGCCACTCTGCAGATAAAATACCTGAGCAGAACCAGCCTGATTCTACTGTTTACTCCTTTCCGTatcaaaaattcaattttatcaccgaaaataatgaaaatgaaactctGCAGCGCCTGCCCTTATCCCCTGTTTCTTCTCCATACGGGGCGTCATCTTCAACTCTGTTTTGTCATGGTTTTGGAGACTTCTCTGCTGCAATTGACTGGCGCGACCACAATTCCGGAAGCTACAGCTATGGCTTTACGAAAATGGGATCTCTGTGCGAACCTTTCGCTTCGGTGCCGAGCTTGAAGACAGAGCAATCTTCAAGCTTAACACCACAAGGCTCAGAGACTCCCGCTTCATCTTATACTAGTGCCGTAGACTGCTTCAGGGGAGCTTCAACCATTGCCAACGACTGCTATGAACTAGCGCCATTGGCACCACCCGAAGCAAACAGTGGCTTGCTGGAGGCATTGGTTATGCAGGGTCAAGCTCTTACCAAGTCCAAGAGTAGGGAGCATTCAACAACTGCAGAGGCATTCTCTATCAAGGGAAAAGCCGCGGCAACCGAGAAATATGCacaagaggaagaagacaCGGTGCCAGTGGAGTCAGGAACGAAGAACATTAATGGAGACACAGCTCAGAATGAGTTGAACTTTTCTCAATCAGCAAAAGggaagaaaagaattgcCGATCAGGATCCATTAATGGAGGAGATGAACTCCATGGACGATGACTTGTTCAGCTTGCTCAACAATTATCCCTCAGAGATGCCAATGCCCGAGTGGTACCGTATAGGAGAAGGGCAATCCCTGGGGATTGAGACTCGAGGAGATGAACCAGCTGGGCCCACTAATCAGGAACTTTCCTGGACTCTGGGATATgctaaattgatgaaaatgagTTG 1451 0.4369 MPRNTQNNVRDEGGVSLRNENTTNEGGNKKETLKKGPWTTQEDAILMEYVKKYGEGNWNSVHKNTGLARCGKSCRLRWANHLRPNLKKGAFSADEEKLMIELHAKLGNKWARMASQLPGRTDNEIKNFWNTRMKRRQRAGLSLYPQDVQDEADDAYRVEQNQSFTSSFSYPSIPSNSYGQKFNQLSHSADKIPEQNQPDSTVYSFPYQKFNFITENNENETLQRLPLSPVSSPYGASSSTLFCHGFGDFSAAIDWRDHNSGSYSYGFTKMGSLCEPFASVPSLKTEQSSSLTPQGSETPASSYTSAVDCFRGASTIANDCYELAPLAPPEANSGLLEALVMQGQALTKSKSREHSTTAEAFSIKGKAAATEKYAQEEEDTVPVESGTKNINGDTAQNELNFSQSAKGKKRIADQDPLMEEMNSMDDDLFSLLNNYPSEMPMPEWYRIGEGQSLGIETRGDEPAGPTNQELSWTLGYAKLMKMS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00485 483 SMART sant 87 135 IPR001005 -
Bva09g00485 483 SMART sant 34 84 IPR001005 -
Bva09g00485 483 MobiDBLite consensus disorder prediction 375 394 - -
Bva09g00485 483 SUPERFAMILY Homeodomain-like 33 129 IPR009057 -
Bva09g00485 483 MobiDBLite consensus disorder prediction 1 23 - -
Bva09g00485 483 Gene3D - 34 87 - -
Bva09g00485 483 Gene3D - 90 162 - -
Bva09g00485 483 Pfam Myb-like DNA-binding domain 88 131 IPR001005 -
Bva09g00485 483 Pfam Myb-like DNA-binding domain 35 82 IPR001005 -
Bva09g00485 483 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 137 IPR017930 -
Bva09g00485 483 MobiDBLite consensus disorder prediction 1 36 - -
Bva09g00485 483 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 86 IPR017930 -
Bva09g00485 483 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Bva09g00485 483 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 21 451 - -
Bva09g00485 483 CDD SANT 37 82 IPR001005 -
Bva09g00485 483 CDD SANT 90 131 IPR001005 -
Bva09g00485 483 ProSiteProfiles Myb-like domain profile. 30 82 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00485 Bva-Chr9 2577003 2579735 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00485 33 452 MYB Transcription Factor Family AT2G32460 39.073 2.78e-78 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva09g00485 Myb_DNA-binding 1.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00485 K09422 - gmx:100798860 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00485 09 2577003 2579735 Bva09g00485 09 2577003 2579735 ECH