Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00479 ATGGCCAGAGGGGGTGGACTCTCCATTGATTCAGATCCAACTGGGAGCTTCCTTCTCCACAATCCAGTTGTTCTCAATTCTTTTCCCGAAGATAACAATCCCAAGTGGAAACTTGCTCACATGGATGGCTCTGTTGGCACCAAAAGGTCTTCCCCCGGCAGTTCCATCCCATTCCAAGTCAACCTTAACTGTGCCCACGATAGCCACCGCTCTTCCTCACCTTCTGATGATAAGAGAGCCATCATCGACGAGATGGACTTTTTCGCTGATAAGAAGATCAAGGATGACCAGGTTGTCTCGGCCTCTGCTTCTGCTGATGCAACAGATAAGCACGATTCCGCTTCTACACCTTTGTTGGGATTCAAAGTTAACacTGGTCTGAATCTTCTTACTACCAACACCAGCAGTGACCAATCCATGGTTGATGATGATCTATCAACCAGTTTAGAAGATAGAAGAGCTAAGACTGAGCTGGCTGTTCTTCAAGCTGAGCTTGAGAGAATGAAGGTGGAGAATCATCAATTGCGTGGAATGCTCGAAGAATTAAATGCCAATTACAGTGCCCTGCACATGCATTTTGCTACAGTGATGCAGGAGCAGAAGGGTGGGCccgaagaaaagaaacaaactgGGAATGGAGGAGCATTAGTGCCAAGGCAGTTTATGGATCTTGGGTTGGCTACTAATGCTGATATCGATGAGGCTTCGATTTCTTCTTCAGAGGGGAGAAGCCATGACCAGTCAGGGTCACCGGGAAACAACGCTGAATTGGTCTCCAAGGAATTTGGTAAGAGGAAGAATGGGATTAATGATGAAGGGCTTGTGTTTGatcaagacaaaaaagaatatggcAGGGGAGTTGAAAGAGAGGAAAGCCCCACCTCACAAGATCAAGCTTTTGCTGCTAATAAGACTCCAAGATTCAGTCCTCCAAAAAATATTGATCAAACCGAAGCTACCATGAGGAAGGCAAGGGTCTCGGTTAGAGCTCGGTCAGAGGCGCCAATGATCACTGATGGCTGCCAATGGCGCAAGTATGGGCAGAAAATGGCTAAAGGAAACCCGTGTCCTAGAGCTTATTATCGTTGCACCATGGCTGCTGGTTGTCCAGTTAGAAAACAGGTACAAAGGTGTGCTGAGGACAGGACTATCCTTATCACTACATACGAAGGCAATCATAGCCATCCTTTGCCACCTGCGGCAATGGCAATGGCACAGACAACTTCATCAGCAGCAAGAATGTTACTTTCAGGATCAATGTCAAGTACTGATGGGCTAATGAATGCAAATTTCCTTACAAGGACACTGCTTCCTTGCTCTTCTAGCATGGCAACAATCTCAGCCTCAGCTCCATTCCCAACTGTTACATTGGATTTAACCCAGTCCCCAAACCCACTACAGTTTCCGAGGTCACCAGGCCAATTTCAAATCCCTTTCCCTGGTATCCCTCAGAATTTTGTCAATTCCCCAGCCTCGTTGCTACCTCAAATTTTTGGTCAGGCATTGTATAACCAATCAAAGTTCTCTGGCGTTCAAATGTCACAAAATGCGGACCCTTCTCAATTGGGTAACCAATCTCAACAGACACCACAACAACTTGCTGACTCATTTAGTGCTGCTACTGCTACCATTGCAGCTGACCCCAACTTAGCTGCTGCTTTAGCAGCTGCTATCACTTCCATATTCGGTGGTGCTCAGCCAAACACTAGTGGTAACAATGTCAACCTGACAGGAACCAACAGCAGTAATGGCAATATTACAACCAGCAACAGTAACAGCAACGGAAGCAATAAAATTAGCAATTCCAATTTCTCAGGAAATTA 1823 0.4515 MARGGGLSIDSDPTGSFLLHNPVVLNSFPEDNNPKWKLAHMDGSVGTKRSSPGSSIPFQVNLNCAHDSHRSSSPSDDKRAIIDEMDFFADKKIKDDQVVSASASADATDKHDSASTPLLGFKVNTGLNLLTTNTSSDQSMVDDDLSTSLEDRRAKTELAVLQAELERMKVENHQLRGMLEELNANYSALHMHFATVMQEQKGGPEEKKQTGNGGALVPRQFMDLGLATNADIDEASISSSEGRSHDQSGSPGNNAELVSKEFGKRKNGINDEGLVFDQDKKEYGRGVEREESPTSQDQAFAANKTPRFSPPKNIDQTEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILITTYEGNHSHPLPPAAMAMAQTTSSAARMLLSGSMSSTDGLMNANFLTRTLLPCSSSMATISASAPFPTVTLDLTQSPNPLQFPRSPGQFQIPFPGIPQNFVNSPASLLPQIFGQALYNQSKFSGVQMSQNADPSQLGNQSQQTPQQLADSFSAATATIAADPNLAAALAAAITSIFGGAQPNTSGNNVNLTGTNSSNGNITTSNSNSNGSNKISNSNFSGN 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00479 607 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 57 593 IPR044810 GO:0003700
Bva09g00479 607 SUPERFAMILY WRKY DNA-binding domain 330 398 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva09g00479 607 MobiDBLite consensus disorder prediction 512 534 - -
Bva09g00479 607 MobiDBLite consensus disorder prediction 293 314 - -
Bva09g00479 607 MobiDBLite consensus disorder prediction 567 607 - -
Bva09g00479 607 PANTHER OS05G0567200 PROTEIN 57 593 - -
Bva09g00479 607 Gene3D WRKY domain 322 399 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva09g00479 607 SMART WRKY_cls 337 397 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva09g00479 607 MobiDBLite consensus disorder prediction 259 292 - -
Bva09g00479 607 MobiDBLite consensus disorder prediction 236 255 - -
Bva09g00479 607 MobiDBLite consensus disorder prediction 236 314 - -
Bva09g00479 607 Coils Coil 151 185 - -
Bva09g00479 607 ProSiteProfiles WRKY domain profile. 332 398 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva09g00479 607 Pfam WRKY DNA -binding domain 339 396 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00479 Bva-Chr9 2541899 2544505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00479 21 575 WRKY Transcription Factor Family AT1G62300 46.115 1.04e-134 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva09g00479 WRKY 7.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00479 - - gmx:100127384 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00479 09 2541899 2544505 Bva07g02164 07 18193687 18196139 BWGD
Bva09g00479 09 2541899 2544505 Bva12g02724 12 19885875 19888701 ECH
Bva09g00479 09 2541899 2544505 Bva09g00479 09 2541899 2544505 ECH
Bva09g00479 09 2541899 2544505 Bva14g00627 14 2945691 2948103 ECH
Bva09g00479 09 2541899 2544505 Bva13g00528 13 2396866 2399356 ECH