Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00464 ATGTATAACGGCATGATGGATCCTGAACTTATTAGACTCGCTCAGGAACAGATGAGTCGCATGTCACCAGCCGAGTTGGCTGGGATCCAGCAGCAGATGATGTCTAATCCAGAGTTGATGAGGATGGCCTCAGAAAGCATGAAGAACATGAGGCCTGAAGACTTTAAATTTGCTGCAGAACAGTTTAAGCACACCCGCCCAGAAGAGATGGCTGAGATAGGTCAGAAGATGGCTAATGCATCTCCCGAAGAATTAGCAGCTATGCGTGCTCGTGTTGATGCACAGATGACATATGAATTGAATGCAGCTGAGATGCTGAAGAAGCAGGGGAATGACCTTCATACTCAGGGGAGGTTCCATGATGCTCTACAGAAGTATTTGCTGgCTAAGAAAAACATTAAAGACATTCCCTCTGCCCCAAGTAGAAAGCTTCAGTTGGCATGCTCTCTCAACTTGATGTCCTGTTACTTGAAGTTAGGGCAGTATAATGAATGCATAAAAGAAGGTTCTGAGGTTTTGGCATATGATGCTAAGAATCTTAAGGCTCTATACCGAAGAGGTCAAGCATATAAGGAACTGGGCCTACTAAAGGATGCTGTAGCTGATTTGAGCATGGCACATGACGTGTCCCCTGATGATGACACAGTAACAGAGCTTTTAAGGGATGCAAAGGAACTTGTAGCAAAGGAATGTGGTGAGCATGCACCAGGAAGATTAGTAATTGAAGAAATAACTGAGGAAGTTGAGAGTGCACCTTCGGATAGCTACAGAAGCTCATCTGTGGAACAAACAGGAGCAAAGCCAATTTCTAAGGAATCTTCTAACAGTCACAGTGCAGTTAGAAGTGGAAATCCAAAAGCAAATATAGAGAGTTTACATTCAATTAAAAACGACCCAGAAGCTATCAGATCGTTCcagaatttcttttcaaatgcCGATCCTGCCACTCTGGCTTCTTTGAATACTGGACAACCCGCAGATGTGTCTCCTGATATGATTAGAACTGCTTCAAATATGATTAGCAAGATGTCACCAGAGGAGCTTCAGAAAATGTTTGACATGGCTTCTTCATTTCAGGGGGACAACCCATTTTTCAGAGGAGTTTCCCCCAACACTGGTGTTAACCCAGGATCAATTCCCCCCAATGTGACACCTGACATGTTTAAAACAGCTACTGATATGATGAGCAAAATGTCACCAGAGGATCTTCAGAATATGTTGAAAATGGCGTCCACAATGAAAGGGAAAGAATCCATTCCATTGTCTCCTGATGTAGACAcgaatatttcaaaatattctgAAGTCCAGGAAAATCTTTCGGTTGATGGTGATTCTAGTTCTTCCCACAATACATTTTCGAATCTCAAAAATGCTTCTCATTCAAGCTTCCCATCCTCAAGTACTGATTTGCAAGAACAGATGAGAAACCAGATGAAAGATCCAGCCACGCGGCAGATGTTCACctcaatgattaaaaatatgagcCCTGAAATGATGGCAAACATGGGTGAACAGTTTGGTTTCAAGCTTTCACGGGAAGATGCAGCAAAGGCTCAACAAGCCATGTCATCCTTATCACCAGAGGACTTGGATAAAATGTTGCGTTGGGCAGATAAGATTCAAAATGCAGCTGAAGGAGTAAAGAAGACGAAAAACTGGCTGCTAGGGAAACCCGGAATGATCTTTGCTATATGTATGCTCATTTTGGCTATGATTCTTCACCGGCTAGGCTTCATTGGTGGCTA 1745 0.4189 MYNGMMDPELIRLAQEQMSRMSPAELAGIQQQMMSNPELMRMASESMKNMRPEDFKFAAEQFKHTRPEEMAEIGQKMANASPEELAAMRARVDAQMTYELNAAEMLKKQGNDLHTQGRFHDALQKYLLAKKNIKDIPSAPSRKLQLACSLNLMSCYLKLGQYNECIKEGSEVLAYDAKNLKALYRRGQAYKELGLLKDAVADLSMAHDVSPDDDTVTELLRDAKELVAKECGEHAPGRLVIEEITEEVESAPSDSYRSSSVEQTGAKPISKESSNSHSAVRSGNPKANIESLHSIKNDPEAIRSFQNFFSNADPATLASLNTGQPADVSPDMIRTASNMISKMSPEELQKMFDMASSFQGDNPFFRGVSPNTGVNPGSIPPNVTPDMFKTATDMMSKMSPEDLQNMLKMASTMKGKESIPLSPDVDTNISKYSEVQENLSVDGDSSSSHNTFSNLKNASHSSFPSSSTDLQEQMRNQMKDPATRQMFTSMIKNMSPEMMANMGEQFGFKLSREDAAKAQQAMSSLSPEDLDKMLRWADKIQNAAEGVKKTKNWLLGKPGMIFAICMLILAMILHRLGFIGG 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00464 581 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Bva09g00464 581 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 59 580 - -
Bva09g00464 581 MobiDBLite consensus disorder prediction 439 475 - -
Bva09g00464 581 Gene3D Tetratricopeptide repeat domain 91 234 IPR011990 GO:0005515
Bva09g00464 581 SMART tpr_5 146 179 IPR019734 GO:0005515
Bva09g00464 581 SMART tpr_5 103 136 IPR019734 GO:0005515
Bva09g00464 581 SMART tpr_5 180 213 IPR019734 GO:0005515
Bva09g00464 581 SUPERFAMILY TPR-like 100 222 IPR011990 GO:0005515
Bva09g00464 581 PANTHER OUTER ENVELOPE PROTEIN 61 59 580 - -
Bva09g00464 581 MobiDBLite consensus disorder prediction 248 286 - -
Bva09g00464 581 MobiDBLite consensus disorder prediction 251 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00464 Bva-Chr9 2483449 2487956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00464 100 227 Calmodulin-binding Proteins AT5G48570 34.328 1.64e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00464 - - gmx:100800315 844.343