Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00459 ATGTCAATGGACATGATGGCAACTGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTTTAGCGGTTAGCGTTCCATGCAGCAGTTTGCTCACCATAGTGACGGTTAGATGTGGGCATTGTGCCAATTTGCTATCAGTTAACATGGAAGCGTCCCTTCAGACATTTCCTCCTCAAGACCCTCAGTCACAGAAACAACATCTAAGTTTTGAAGAATCAAGCAGCAAGGAGATGGGATCATCTTCAAAATGCAGCAAATTAGCTTCATTTGAGTCTGTAGAGCATGAGCAACCTAGGATTCCTCCCATTCGCCCCCCAGAAAAGAGACAACGTGTTCCTTCTGCTTATAACCGGTTCATTAAGGAGGAAATTCAAAGGATTAAGGCTAGTAATCCTGATATCAGCCACAGAGAGGCTTTCAGCACAGCAGCCAAAAATTGGGCACATTTCCCTCACATTCACTTTGGGTTAAAGCTGGATGGAAACAAGCAAACAAAGTTGGACCTGCAAGGGGATCAGGGAACTCAAAAGTCTAATGGATTTTActg 554 0.435 MSMDMMATERVCYVHCNFCNTILAVSVPCSSLLTIVTVRCGHCANLLSVNMEASLQTFPPQDPQKQHLSFEESSSKEMGSSSKCSKLASFESVEHEQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQTKLDLQGDQGTQKSNGFY 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00459 182 PANTHER PLANT-SPECIFIC TRANSCRIPTION FACTOR YABBY FAMILY PROTEIN 1 182 - -
Bva09g00459 182 SUPERFAMILY HMG-box 100 150 IPR036910 -
Bva09g00459 182 Pfam YABBY protein 7 157 IPR006780 GO:0007275
Bva09g00459 182 MobiDBLite consensus disorder prediction 58 112 - -
Bva09g00459 182 MobiDBLite consensus disorder prediction 89 106 - -
Bva09g00459 182 PANTHER PROTEIN YABBY 6-RELATED 1 182 IPR006780 GO:0007275
Bva09g00459 182 Gene3D High mobility group box domain 94 152 IPR036910 -
Bva09g00459 182 MobiDBLite consensus disorder prediction 58 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00459 Bva-Chr9 2456756 2462738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00459 1 182 C2C2-YABBY Transcription Factor Family AT1G08465 67.021 1.02e-80 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bva09g00459 YABBY 1.8e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00459 K25796 - gmx:100500091 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00459 09 2456756 2462738 Bva07g02184 07 18294464 18301079 BWGD