Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00455 ATGTTTGGGAGAGCACCAAAGAAAAGTGACAACACAAGGTACTATGATATCCTGGGGGTGTCGAAGAACTCTTCTCAGGACGATTTGAAGAAGGCTTACAAGAAAGCCGCCATAAAAAATCATCCCGACAAGGGCGGGGATCCGGAGAAGTTTAAAGAGCTGGCTCAAGCTTATGAGGTTCTGAGTGACCCAGAGAAACGTGAGATATACGATCAATATGGTGAAGATGCACTTAAGGAAGGAATGGGTGGTGGTGGGGGTGGCCATGACccatttgatattttctcgTCTTTCTTCGGTGGTAGTCCATTTGGAGGTGGCAGCAGTAGAGGACGAAGGCAGAGGAGGGGTGAAGATGTTGTTCACCCCCTTAAGGTCTCTCTGGAAGATCTTTACCTGGGGACATCTAAGAAGCTTTCTCTCTCGCGAAATGTATTGTGCTCCAAGTGCAGTGGCAAGGGGTCGAAATCTGGGGCTTCCATGAAATGTGCTGGTTGTCAAGGAACTGGTATGAAGGTTTCTATTAGGCACCTTGGTCCCTCGATGATCCAGCAAATGCAGCACCCTTGCAATGAATGTAAGGGTACTGGAGAAACTATCAATGAGAGAGACCAATGCCCACAGTGCAAGGGACAGAAGGTTGTCCAAGAGAAGAAAGTACTTGAAGTTATTGTGGAGAAGGGTATGCAGAATGGACAGAAGATTACATTCCCTGGTGAAGCAGACGAAGCGCCGGATACAATTACAGGGGATATAGTCTTTGTCCTTCAGCAGAGGGAGCATCCCAAGTTCAAGAGAAAGGGAGAAGACCTTTTTGTAGAGCATACTTTGTCTCTCACTGAAGCGTTATGTGGCTTTCAATTTGTGCTGACTCACTTGGATGGCAGGCAGCTCCTTATTAAGTCTAACCCTGGGGAAGTTGTCAAGCCTGATTCTTACAAGGCAATTAATGATGAGGGAATGCCATTGTATCAGAGGCCATTTATGAAGGGGAAGCTCTACATTCACTTTACCGTGGACTTCCCTGAGTCTCTTAGTCCTGAACAGGTCAAGGCGTTGGAAGCTGTTCTGCCGCCAAGGCCTTCGTCATATTTGACAGATATGGAGTTGGATGAGTGCGAGGAGACTACACTTCACGATGTCAATATTGAGGAGGAGATGAGGAGGAAACAACAAGCAGCTCAGGAGGCGTATGAGGAGGATGAGGACATGCATGGCGGTGCTCAAAGAGTGCAGTGCGCCCAGCAGTA 1250 0.472 MFGRAPKKSDNTRYYDILGVSKNSSQDDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGGSPFGGGSSRGRRQRRGEDVVHPLKVSLEDLYLGTSKKLSLSRNVLCSKCSGKGSKSGASMKCAGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINERDQCPQCKGQKVVQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTITGDIVFVLQQREHPKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDSYKAINDEGMPLYQRPFMKGKLYIHFTVDFPESLSPEQVKALEAVLPPRPSSYLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYEEDEDMHGGAQRVQCAQQ 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00455 416 ProSiteProfiles Zinc finger CR-type profile. 134 218 IPR001305 GO:0031072|GO:0051082
Bva09g00455 416 CDD DnaJ_C 118 345 - -
Bva09g00455 416 CDD DnaJ 14 63 IPR001623 -
Bva09g00455 416 Gene3D - 261 343 - -
Bva09g00455 416 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 144 216 IPR036410 -
Bva09g00455 416 PRINTS DnaJ domain signature 46 66 IPR001623 -
Bva09g00455 416 PRINTS DnaJ domain signature 66 85 IPR001623 -
Bva09g00455 416 PRINTS DnaJ domain signature 15 33 IPR001623 -
Bva09g00455 416 Pfam DnaJ central domain 147 213 IPR001305 GO:0031072|GO:0051082
Bva09g00455 416 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 6 416 IPR044713 GO:0006457|GO:0030544
Bva09g00455 416 Hamap Chaperone protein DnaJ [dnaJ]. 10 376 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bva09g00455 416 Pfam DnaJ domain 14 71 IPR001623 -
Bva09g00455 416 Gene3D - 110 260 - -
Bva09g00455 416 Gene3D - 147 213 - -
Bva09g00455 416 SUPERFAMILY HSP40/DnaJ peptide-binding domain 113 271 IPR008971 GO:0006457|GO:0051082
Bva09g00455 416 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Bva09g00455 416 MobiDBLite consensus disorder prediction 382 416 - -
Bva09g00455 416 Gene3D DnaJ domain 10 109 IPR036869 -
Bva09g00455 416 SMART dnaj_3 12 66 IPR001623 -
Bva09g00455 416 PANTHER CHAPERONE PROTEIN DNAJ 2-RELATED 6 416 - -
Bva09g00455 416 CDD DnaJ_zf 147 213 IPR001305 GO:0031072|GO:0051082
Bva09g00455 416 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Bva09g00455 416 Pfam DnaJ C terminal domain 121 342 IPR002939 -
Bva09g00455 416 Coils Coil 384 404 - -
Bva09g00455 416 SUPERFAMILY Chaperone J-domain 8 107 IPR036869 -
Bva09g00455 416 MobiDBLite consensus disorder prediction 382 407 - -
Bva09g00455 416 SUPERFAMILY HSP40/DnaJ peptide-binding domain 264 353 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00455 Bva-Chr9 2430789 2433265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00455 14 73 C2H2 Transcription Factor Family AT1G74250 43.478 1.98e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00455 K09503 - gmx:547558 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00455 09 2430789 2433265 Bva07g02189 07 18315348 18317821 BWGD
Bva09g00455 09 2430789 2433265 Bva09g00455 09 2430789 2433265 ECH
Bva09g00455 09 2430789 2433265 Bva07g02189 07 18315348 18317821 ECH