Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00431 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGTCGTGGAGCTTTTGGAGCTGCTATTCTCGTCCATCACAAGGCCGAGAAGAAGAAGTATGTATTGAAGAAAATCAGGCTTGCGCGCCAGACTGAACGCTGTAGGAGATCTGCTCATCAAGAAATGGCTCTTATTGCTCGAATCCAACACCCTTACATTGTAGAATTCAAGGAAGCATGGGTTGAGAAGGGCTGCTATGTCTGCATTGTCACTGGCTATTGTGAAGGCGGAGACATGGCTGAATTGATGAAGAAATCAAATGGGGTTTACTTTCCGGAGGAGAAACTCTGCAAGTGGGTCACCCAGTTACTATTGGCAGTTGAATACCTTCATTCCAATTTTGTTCTACATCGTGACCTAAAGTGTTCCAACATCTTTCTTACCAAAGATCAGGATGTTCGCCTTGGGGATTTTGGGCTTGCGAAGACTCTAAAGGCGGATGACTTGGCTTCTTCGGTGGTTGGAACACCCAATTACATGTGTCCCGAACTGCTTGCAGATATTCCTTATGGATTCAAATCTGATATTTGGTCACTAGGTTGCTGTATATATGAGATGGCTGCTCGTCGCCCTGCATTTAAAGCTTTTGATATGGCTGGATTGATAAGCAAGATAAATCGTTCCTCTATTGGCCCATTGCCCTCCTGTTACTCCCCGTCCCTGAAAACACTGATCAAAGGTATGCTGAGAAAAAGTCCAGAGCATCGGCCAACAGCAGCTGAGGTCTTAAAGCACCCTTATTTGCAACCTTATGTTGATCAGTATCGTCCATCTTTCAGTCCTCCAACAACCTGTTCTCCTGAAAAGCCAATTTCTGCTGCCCATGTTTCTCGAAGGAGTATGGCTGAAAGTCAAAACAGTTGTAGTTCGAGTAGTGACAAAGATAGTTTGATGTCCCATGAGAGAAGCATTCCAACAGTAGTGCCAAAGTGTGATGACAAAGGCACTGAAACAGATCTGACATCtattgatgatgaagatggcTCTGAGCATCTTGTGCCtcgtgaagaagaaaatggctcCGGCACTGGCAATGTCAAAGCAGACCAGAAAGAGTTGATGAAACCATCTCAAATTGAAAAGCGATCCAATGATGAATCTAAGCaaccaaaaacaattaaaaatataatgatggCATTAAAAGAGGGAAAAGCTAGAGAAAATAGTTCTCCAATGAGAGGCAACCGCATAAAGGCTGGTGGTGCATCTGTGCAGAAAGCGAATACGCCCAAAACTACTGCTGTTGTTCCTGGCCCAAAGCCTAATTTAGAGTCATCACCATCTGCACCTGCAAAAGCGACTCCTGAATCTGGAAAAAGAATACAAGGATTGCATCCTTTAAAGCATCTGTTACCTGTGCTAGAGTCCTCACCAAAGAATAAACCCAGAATTGATGGGACGCCCCCATCTGGTCCTACTAAACAAGCAGAAGGAGACGGAGTTCCTCCCAAACCAAGGCTGAGGACACCTCCAAGCTTACTTAGAAGACCTTCTTTTGTAGGACGAGTGAGACAGGTTGGGCTTGATGTTCCAAATGGAGCAAGTGATACAGGGAAATTAGGACCAAATAAAGTTCCTCAGGAGCCTGAAAAGAGTCCTTCTCAGTTGCCCAATGGTCTTGTGCCACGCGATTTTAGAGAGACTACAAGAGAGCCTCAAAAGCCTTTTGAAAGAGGTTCAAAAGGAGTGCAAACAGATTGCAGCAATTGTGTTTCATCTTCAGTTTCTATTCAAGGATTTGAGCTTTCTGATGATGCAACAACTTTTATTAACATGAGAGAACAGACACTTCCTGATCATGATAGTGGAACCCGCACTGAAAGCGTAGAACCACATTCACACACTAGCTCAACTGCTACCCATTCCCCCAGTCAGATGACCATAAATACATCCAGGGAAGCCTCTGAGACTACATTGAATCTTCATGATACAACTCCTAGTAATGAGAAAGTAGGTTTGAATTTAACTCCTCATCACCCTGTTCCAGATTCAAAGGAAACGGTTGCCTCTGAAGATTGTTTTTCCATAAATAAACCCAGTATATCTGCTACCTGCGGTTGTTACAATACCTCAGTAAGTCTCTCGGTGGAAGACAATGAACAAGGCAAAGATCTTCAAGATACTGCCAAGGTCACTTCAACTGAGTCTCCTGAACTTCCACACTCTAACCCTGGAGAAAAGTTTGTTTGTAATGAGGTTGCTCCAGTAAGCAATCCCAATAATAGACCTGATATAGTTAGCCAGCCAAAGCTGATGTGCATTTCTAGTGGTGATGATAAATTTACAGTAAGGGAACGGCTGTCTTCAGCGGCTGGAACTGCGCCTCCAATTAATTCTTCCAATATATCTAGCCAGAAAGCTTTGCAAGAGGACAAAGGAACCATTTTGCAGAATCCAGTGACGGAAAGGCCAGCCACGGGCCATCTTCCTCCGGCTTTTGATGATGTTATCCATGTTATCCGGCATAGTAGTTTCCGTGTTGGGAGCGAACAACCAGTTAAGGAAGCTGTGGAGATGGGAGTTCAGAATGTGGATGTtggtaaatttattaatgtgGTAAGGGATGATTTAGAAATGAGAAACATGACCAATCCTGTGAGCCTTAGATCTTCTAGTTGCTCCGAAGCTATGAGCTCGAAGTCTAATATTTCTGAACATTTGGAAACAAGAAACTTGAGCTCTCCTCCAGCCGTCAAATCTTCAAGCTGTTCTGATGCTTTGAGCTTGAAGTCAAATACTTCTGATCATTCCAGCTTAAAGGAACTCGATACGAGAAACCCTGTTTCCCCggtttcaaaatttgattccACCGAGTTTCCTAAACATAACCCTGCAATGGCAGAAGAGGAAACACCAGCCAAGGAAACTTTGGATGTTAAATCCTTTAAGCAGAGAGCAGAGGCCCTCGAAGGACTCTTGGAATTATCTGCAGAGTTACTTCAGCAAAATAGATTGGAGGAACTCGCAGTTGTTCTAAAGCCCTTTGGGAAAGATAAGGTGTCCCCAAGGGAGACGGCCATTTGGTTAGCTAAGAGTCTAAAAGGAATGATGATTGAAGACAGTGCAGGACGGTGTTCATG 3122 0.4279 MESRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGVYFPEEKLCKWVTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAARRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKSPEHRPTAAEVLKHPYLQPYVDQYRPSFSPPTTCSPEKPISAAHVSRRSMAESQNSCSSSSDKDSLMSHERSIPTVVPKCDDKGTETDLTSIDDEDGSEHLVPREEENGSGTGNVKADQKELMKPSQIEKRSNDESKQPKTIKNIMMALKEGKARENSSPMRGNRIKAGGASVQKANTPKTTAVVPGPKPNLESSPSAPAKATPESGKRIQGLHPLKHLLPVLESSPKNKPRIDGTPPSGPTKQAEGDGVPPKPRLRTPPSLLRRPSFVGRVRQVGLDVPNGASDTGKLGPNKVPQEPEKSPSQLPNGLVPRDFRETTREPQKPFERGSKGVQTDCSNCVSSSVSIQGFELSDDATTFINMREQTLPDHDSGTRTESVEPHSHTSSTATHSPSQMTINTSREASETTLNLHDTTPSNEKVGLNLTPHHPVPDSKETVASEDCFSINKPSISATCGCYNTSVSLSVEDNEQGKDLQDTAKVTSTESPELPHSNPGEKFVCNEVAPVSNPNNRPDIVSQPKLMCISSGDDKFTVRERLSSAAGTAPPINSSNISSQKALQEDKGTILQNPVTERPATGHLPPAFDDVIHVIRHSSFRVGSEQPVKEAVEMGVQNVDVGKFINVVRDDLEMRNMTNPVSLRSSSCSEAMSSKSNISEHLETRNLSSPPAVKSSSCSDALSLKSNTSDHSSLKELDTRNPVSPVSKFDSTEFPKHNPAMAEEETPAKETLDVKSFKQRAEALEGLLELSAELLQQNRLEELAVVLKPFGKDKVSPRETAIWLAKSLKGMMIEDSAGRCS 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00431 1040 MobiDBLite consensus disorder prediction 623 666 - -
Bva09g00431 1040 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Bva09g00431 1040 MobiDBLite consensus disorder prediction 309 332 - -
Bva09g00431 1040 MobiDBLite consensus disorder prediction 879 965 - -
Bva09g00431 1040 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 1023 - -
Bva09g00431 1040 MobiDBLite consensus disorder prediction 292 308 - -
Bva09g00431 1040 MobiDBLite consensus disorder prediction 720 734 - -
Bva09g00431 1040 MobiDBLite consensus disorder prediction 879 929 - -
Bva09g00431 1040 MobiDBLite consensus disorder prediction 712 740 - -
Bva09g00431 1040 MobiDBLite consensus disorder prediction 273 581 - -
Bva09g00431 1040 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00431 1040 CDD STKc_Nek 7 262 - -
Bva09g00431 1040 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Bva09g00431 1040 SUPERFAMILY Protein kinase-like (PK-like) 4 319 IPR011009 -
Bva09g00431 1040 MobiDBLite consensus disorder prediction 610 667 - -
Bva09g00431 1040 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00431 1040 MobiDBLite consensus disorder prediction 367 383 - -
Bva09g00431 1040 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Bva09g00431 1040 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00431 1040 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 1023 - -
Bva09g00431 1040 Gene3D Transferase(Phosphotransferase) domain 1 90 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00431 Bva-Chr9 2285830 2291934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00431 12 318 MAP Kinase Kinase Kinase AT3G06030 31.288 1.45e-36 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Bva09g00431 Pkinase 5.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00431 K08857 - gmx:100818747 1324.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00431 09 2285830 2291934 Bva07g02212 07 18475745 18481673 BWGD
Bva09g00431 09 2285830 2291934 Bva09g00431 09 2285830 2291934 ECH