Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00425 ATGTCTCCCAAAAAAAGAAGCCTTATAAGGACTATTCTCACAGCAAATGGTGGGTGTGGCTGTGGCAAACCAAAGCGCTCTGATGTATACGAGCCCACCCCCAAGCCTAAACCCAAAATCTCAGTTTCTAACCCGAATCCCGCCAGCAGCGTCACTTCCTCAACTACTTCCGGCGCCGAACCAAACGCTAACGGCGGTGACTTCGAAGAAGATTTCACGTTCACCACATTCTCCGAAGCCGAAACTGATAGCAAGAGCCCCAGGTTCGTGTTACCAAAACAGAGTCCGAAACTGAATGACAGCGTCGCCATTGAGAAGGACTCGGAGAACCCATATAAGGATTTTCGTCATTCCATGCTCCAAATGATATTTGAGAAAGAGATCTTCTCACGGCCTGATCTCCAAGACCTTCTTCAATGCTTTCTTCAGCTCAATTCTCCTTCTCATCACCAACTCATAGTTAGAGCCTTCAATGAGATCTGTGAGCAAGCATTCCCCAGTTCCACCAAGAAAGACGTCACTCATCACCAGAATCAATG 539 0.475 MSPKKRSLIRTILTANGGCGCGKPKRSDVYEPTPKPKPKISVSNPNPASSVTSSTTSGAEPNANGGDFEEDFTFTTFSEAETDSKSPRFVLPKQSPKLNDSVAIEKDSENPYKDFRHSMLQMIFEKEIFSRPDLQDLLQCFLQLNSPSHHQLIVRAFNEICEQAFPSSTKKDVTHHQNQ 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00425 179 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Bva09g00425 179 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 168 - -
Bva09g00425 179 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 168 IPR038933 GO:0045892
Bva09g00425 179 MobiDBLite consensus disorder prediction 69 83 - -
Bva09g00425 179 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 102 161 IPR006458 -
Bva09g00425 179 Pfam Transcriptional repressor, ovate 108 163 IPR006458 -
Bva09g00425 179 MobiDBLite consensus disorder prediction 15 95 - -
Bva09g00425 179 MobiDBLite consensus disorder prediction 42 62 - -
Bva09g00425 179 ProSiteProfiles OVATE domain profile. 104 163 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00425 Bva-Chr9 2255640 2256451 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Bva09g00425 Ovate 9.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00425 - - gmx:102670259 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00425 09 2255640 2256451 Bva09g00425 09 2255640 2256451 ECH