Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00421 ATGGGGGAAATTGTTAAGGtgaacaaagaaaacagagaGGAGGGTTCGCAGCTTCAGAGGATGGACGGGGTTACGAGGGAAGCACAGATGTCAATCGCTGCGTCTTCTATGTTTCCTGGCTTTAGGTTCTGTCCCACCGACGAGGAACTGATTTCATATTACCTCGCCAAGAAATTAGATGGCCATGAAGAGAGTGTGCAAGTCATTTCTGAGGTTGAAATTTGTAGATTTGAGCCTTGGGATTTGCCAGCCAAATCATTCATTCAATCAGAAAACGAGTGGTTTTTCTTCTCCCCTCGTGGAAGAAAGTACCCAAATGGGTCACAAAGTAAGAGGGCAACTGAACATGGTTATTGGAAGGCCACTGGGAAAGAGCGCAATGTAAAGTCGGGTAATAATGTCATAGGTACCAAGCGGACTCTGGTATTTCACTTGGGTCGTGCACCAAAAGGGGAAAGGACTGAATGGATTATGCATGAGTACTGCGTCAACGACAAAGCTCAGGATACTTTGGTTGTCTGTCGCCTCAAGAGGAACACTGAGTTCCGTTTGAATGATGCCTCAAATAGAGCCTCTTCAATTCAAGGGCAAGCTGGAACTTCACACGAAAGTAACTGTGCTATATCTGATACGGGCACTGATCAATTGGGTGTCTCTGAGCATAAAGCGGCTGAATGTAGCTCCAAACGGAGTAACAGCAGTTATGATTCTCCTTCAGTAGAGCAAATTGATTCTGCCACCGAATCTAATCGTAGATCAAGTCCAACAAATGACCCTAACATTACTGAATCTACAAGTCACCAAAAGGATGTGGATGTGGATGTGGACGAAGAGGATTTCTATGCTGACATACTAAAAGATGATATCATCAAGCTAGATGAATCTTCAATGACGCAAGGGGCCTACACAGGATTACAGGATCCAGCCTACACAGGATTACAGGATCCAGCACAGATACCTCATTCCCAAGGCACAGCACAACGAAGAATAAGATTGAAGCTTCGGAGATCAACGCATTCTTCAGCTAGAGTAGTCAAGTTAGAAAAGCCAAGCCATACAGCTACACGAATTCGTTTCCCAAGCTCAAAGCACTCATCAAGCAGTAGCTTCTTTACCCTATTTGTTCTGCTCGTGTTCTTCTCGGTTGTTCTATTTTTGTCTCTATTGGGAGGTCTTAAACAAGTGAAAAGTTGCGGGATATTTGATTTCGAATGTAAACTGTA 1223 0.435 MGEIVKVNKENREEGSQLQRMDGVTREAQMSIAASSMFPGFRFCPTDEELISYYLAKKLDGHEESVQVISEVEICRFEPWDLPAKSFIQSENEWFFFSPRGRKYPNGSQSKRATEHGYWKATGKERNVKSGNNVIGTKRTLVFHLGRAPKGERTEWIMHEYCVNDKAQDTLVVCRLKRNTEFRLNDASNRASSIQGQAGTSHESNCAISDTGTDQLGVSEHKAAECSSKRSNSSYDSPSVEQIDSATESNRRSSPTNDPNITESTSHQKDVDVDVDEEDFYADILKDDIIKLDESSMTQGAYTGLQDPAYTGLQDPAQIPHSQGTAQRRIRLKLRRSTHSSARVVKLEKPSHTATRIRFPSSKHSSSSSFFTLFVLLVFFSVVLFLSLLGGLKQVKSCGIFDFECKL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00421 407 Pfam No apical meristem (NAM) protein 39 162 IPR003441 GO:0003677|GO:0006355
Bva09g00421 407 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 31 378 - -
Bva09g00421 407 MobiDBLite consensus disorder prediction 228 264 - -
Bva09g00421 407 Gene3D NAC domain 46 184 IPR036093 GO:0003677|GO:0006355
Bva09g00421 407 SUPERFAMILY NAC domain 29 178 IPR036093 GO:0003677|GO:0006355
Bva09g00421 407 MobiDBLite consensus disorder prediction 188 273 - -
Bva09g00421 407 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 31 378 - -
Bva09g00421 407 MobiDBLite consensus disorder prediction 188 216 - -
Bva09g00421 407 ProSiteProfiles NAC domain profile. 37 179 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00421 Bva-Chr9 2239100 2241728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00421 24 297 NAC Transcription Factor Family AT2G27300 55.109 1.04e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva09g00421 NAM 2.5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00421 - - gsj:114373381 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00421 09 2239100 2241728 Bva09g00421 09 2239100 2241728 ECH