Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00407 ATGGAAGAGCTACCACCTGGTTTTCGATTCTACCCAACGGAAGAAGAACTAGTTGCCTTCTATCTGCATCACAAGCTCCAAGGCCAAAGAGACGACATGAACAGAGTCATCCCTGTAATTGACATCTATAGAGTAGAACCCTGGGACCTTCCAAAACTTGCAGGAGAGCTGTGCCTGGGAGACGCGGAGCAATGGTTCTTCTTTTCACCAAGACAAGAGAGAGAAGCCAGGGGAGGGAGACCCATCAGAACCACAGCTACTGGGTATTGGAAAGCCACAGGCTCACCCGGGTACGTTTACTCTTCTAACAATAGCGTCATTGGGGTGAAGAAAACCATGGTATTTTACAAAGGGAAAGCTCCAACCGGAAGGAAAACCAAATGGAAGTTGAACGAGTACAAAGCCATTGAAGTCTCCAATCAATCCAGCAACGCTCCCAAGTTGAGGCATGAATTCAGCTTGTGCCGGGTTTATGTGATATCCGGAAGCTTTCGAGCATTTGATCGGCGCCCACTTGACGGGGAGAGAGGTGGCGCAGTTGCAATTTCTAAGCCGGAAGCGGCAGCTGACAGAGCGAGCTCATCTGAAACTTCCCACTCAGGAGGGGATAATGGCACTGATCTCCCTCAAGCTGGGGAATCAAGTAATGTGAACTGGAATGTAAATGAAGGTGTAGGAGACCCGCTATGGGACTGGGAAACTCTAAACTGGCCCTA 716 0.4944 MEELPPGFRFYPTEEELVAFYLHHKLQGQRDDMNRVIPVIDIYRVEPWDLPKLAGELCLGDAEQWFFFSPRQEREARGGRPIRTTATGYWKATGSPGYVYSSNNSVIGVKKTMVFYKGKAPTGRKTKWKLNEYKAIEVSNQSSNAPKLRHEFSLCRVYVISGSFRAFDRRPLDGERGGAVAISKPEAAADRASSSETSHSGGDNGTDLPQAGESSNVNWNVNEGVGDPLWDWETLNWP 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00407 238 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 238 - -
Bva09g00407 238 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
Bva09g00407 238 MobiDBLite consensus disorder prediction 190 220 - -
Bva09g00407 238 MobiDBLite consensus disorder prediction 175 220 - -
Bva09g00407 238 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Bva09g00407 238 Gene3D NAC domain 13 163 IPR036093 GO:0003677|GO:0006355
Bva09g00407 238 ProSiteProfiles NAC domain profile. 4 160 IPR003441 GO:0003677|GO:0006355
Bva09g00407 238 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00407 Bva-Chr9 2181697 2182995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00407 2 238 NAC Transcription Factor Family AT5G22380 58.921 7.20e-98 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva09g00407 NAM 4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00407 - - gmx:100780264 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00407 09 2181697 2182995 Bva07g02235 07 18580948 18582074 BWGD
Bva09g00407 09 2181697 2182995 Bva09g00407 09 2181697 2182995 ECH