Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00396 ATGGGAGATACGGAGAAGGCGGTGCCGGAGACGGAGGAGCTCCCAAGGACTATCGTGCGCCGTATAGTGAAGGATAAGTTGTCACGTTGCTCCAAAGACGGAGACATTTCAGTTCACAAAGATGCTCTCCTTGCTTTCGCCGAAAGCGCACGGATCTTCATCCACTACATTTCGGCAACGGCTAATGATATATGCAAGGAGTCAAAGAGACAGATATTGAATGCTGATGATATATTTAAAGCTCTTGAAGAAACTGAGTTCCATGAGTTTGTGCGGCCTCTAAAAGCCTCACTTGAAGAGTTTAAGAGGAAGAATGCTGGGAAGAAAGCAGAAGCATCAAAGgctaaagaaattaaaaagaagagaaagttggAAGACGAGTCATCTGATAAAGGCGTGGATGCTGACGGCAAATG 416 0.4303 MGDTEKAVPETEELPRTIVRRIVKDKLSRCSKDGDISVHKDALLAFAESARIFIHYISATANDICKESKRQILNADDIFKALEETEFHEFVRPLKASLEEFKRKNAGKKAEASKAKEIKKKRKLEDESSDKGVDADGK 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00396 138 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 4 131 - -
Bva09g00396 138 Coils Coil 98 127 - -
Bva09g00396 138 Gene3D Histone, subunit A 4 137 IPR009072 GO:0046982
Bva09g00396 138 MobiDBLite consensus disorder prediction 107 138 - -
Bva09g00396 138 SUPERFAMILY Histone-fold 14 120 IPR009072 GO:0046982
Bva09g00396 138 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 82 IPR003958 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00396 14 114 CCAAT-HAP3 Transcription Factor Family AT4G14540 31.683 3.53e-11 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bva09g00396 CBFD_NFYB_HMF 8.5e-10 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00396 K02326 - mnt:21405152 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00396 09 2134250 2135885 Bva09g00396 09 2134250 2135885 ECH