Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00391 ATGACTGAttccaaagagaaaaagcGAAACTTTGTGGAGACCATTGAACTCCAGATTGGTCTGAAAAACTATGATCCACAGAAGGATAAGCGTTTTAGTGGTTCTGTGAAACTGCCCCACATCCCTCGCCCTAAGATGAAGATATGCATGCTTGGAGATGCTCAGCACGTTGAAGAgGCAGAGAAGATAGGCATGGACTATATGGATGTGGAAGCGTTGAAGAAGcttaacaaaaacaagaaactgGTTAAGAAACTTGCTAAAAAGTACCATGCATTTTTAGCTTCTGAAGCAGTCATTAAGCAGATTCCCCGTCTTTTGGGTCCTGGTCTTAACAAGGCAGGAAAATTTCCCACTCTTGTTACTCACCAGGAATCTCTAGAGTCAAAGGTTAACGAAACCAAGGCTACAGTAAAATTCCAGCTTAAGAAGGTTCTTTGCATGGGAGTTGCTGTGGGGAACGTTAGTATGGAGGAAAAGCAGATCTTCCAAAACGTACAAATGAGCGTTAACTTCCTTGTCTCCCTTTTGAAAAAGAACTGGCAGAATGTTCGCTGCTTGTATCTGAAGAGTACTATGGGAAAATCATACCGAGTCTTTTG 602 0.3987 MTDSKEKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGMDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNVSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00391 200 ProSitePatterns Ribosomal protein L1 signature. 100 119 IPR023673 -
Bva09g00391 200 Gene3D - 5 195 - -
Bva09g00391 200 Gene3D - 49 138 IPR016095 -
Bva09g00391 200 PANTHER 60S RIBOSOMAL PROTEIN L10A-3 1 198 - -
Bva09g00391 200 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 1 198 - -
Bva09g00391 200 SUPERFAMILY Ribosomal protein L1 6 200 IPR023674 -
Bva09g00391 200 Pfam Ribosomal protein L1p/L10e family 5 194 IPR028364 -
Bva09g00391 200 PIRSF RPL1p_RPL1a_RPL10e_RPL1o 2 200 IPR002143 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Bva09g00391 200 CDD Ribosomal_L1 5 199 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00391 Bva-Chr9 2112702 2114801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00391 4 200 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 92.893 3.45e-123 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00391 K02865 - gmx:100305550 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00391 09 2112702 2114801 Bva09g00391 09 2112702 2114801 ECH