Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00389 ATGTATCATCATCACCAACATCAAGGAAAGAACATCCATTATTCTTCCGGAATGCCGATCCCATCTGAGAGGCATATCTTCCTTCAAGCCAGCAATGGATCCGGTGACTCAGGACTTGTACTCTCAACTGATGCTAAGCCTAGGCTGAAATGGACACCAGATCTTCATGCAAGGTTTATAGAAGCAGTCAATCAGTTAGGAGGAGCTGACAAGGCAACTCCAAAAACTGTAATGAAACTCATGGGGATTCCGGGGCTTACCTTATATCACCTAAAGAGCCATCTTCAGAAGTACAGATTGAGCAAGAATATGCATGGGCAAAGTAATAACGTGACCTCAAAAATCAGTGCAGCAACAGTAGAAAGATTTTCTGAAACAAATGCTACTCATGTGAACAATCTTAGCCTTGGGCCGCAGTCAAACAAAGATTTGCAGATAGGCGAGGCACTGCAAATGCAGATTGAGGTGCAGAGAAGGCTAAATGAACAACTTGAGGTACAGAGACACCTGCAACTCCGCATTGAGGCTCAAGGAAAATACCTGCAGGCTGTGCTGGAGAAAGCTCAGGAGACACTTGGTAGACAGAATTTGGGCGTAGCAGGACTTGAAGCTACTAAAGTTCAACTGTCAGAGCTCGTATCCAAAGTATCCTCAGAGTGTctaaattcttcattttcagaGTTGAAGGAATTACCAGCATTCTGCCACCAGCAAACGCAAACCAACCAGCCAACAGACTGCTCAATGGACAGTTGCCTCACATCATGCGAGGGATCTCAAAAGGAGCAAGATATACAAAATGGGGGAATGGGGTTAAGACCATTCAATGGCCACACATTCATGGAGAGAAAAGAAGCCGTCGAGGCACCCATTCTTCGGAACTCTGAACTCAAGTGGCGTGATGAAGTGAAAAAGAACACCTTCCTTACCCCTTTAGGCAATAATGTAGAAAGAAGAAGCTATGCTATTGATAGAAGTCCCAGCAACTTGTCTATGAGCATTGGACTTGAAGGAGAAACAGAGAATGGCAACAGCATGTACTCTGAAAGAATAATCATGGAAAGGGAGGCAGATGGTGAATTCCGAAACGCCGGCAGGACAGAGTCAATGAAACCAGTGGATGAAAAAATCTCTCGAGATTATAGATTGCCTTACTTTGCAGCATCAAGACTGGATCTAAATACCCGGGGAGAAAATGAAGCTCCAACGAATTGTAAACAACTAGACTTGAATGGATTCAGTTGGAGTTG 1250 0.4376 MYHHHQHQGKNIHYSSGMPIPSERHIFLQASNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNMHGQSNNVTSKISAATVERFSETNATHVNNLSLGPQSNKDLQIGEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGVAGLEATKVQLSELVSKVSSECLNSSFSELKELPAFCHQQTQTNQPTDCSMDSCLTSCEGSQKEQDIQNGGMGLRPFNGHTFMERKEAVEAPILRNSELKWRDEVKKNTFLTPLGNNVERRSYAIDRSPSNLSMSIGLEGETENGNSMYSERIIMEREADGEFRNAGRTESMKPVDEKISRDYRLPYFAASRLDLNTRGENEAPTNCKQLDLNGFSWS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00389 416 PANTHER MYB-RELATED PROTEIN 2 4 416 - -
Bva09g00389 416 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 416 IPR044848 GO:0003700
Bva09g00389 416 Pfam Myb-like DNA-binding domain 48 99 IPR001005 -
Bva09g00389 416 Pfam MYB-CC type transfactor, LHEQLE motif 145 191 IPR025756 -
Bva09g00389 416 Gene3D - 45 103 - -
Bva09g00389 416 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Bva09g00389 416 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Bva09g00389 416 SUPERFAMILY Homeodomain-like 45 101 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00389 Bva-Chr9 2107485 2110070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00389 78 416 G2-like Transcription Factor Family AT3G04030 53.509 6.68e-112 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva09g00389 Myb_DNA-binding 3.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00389 - - gmx:100810396 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00389 09 2107485 2110070 Bva07g02255 07 18655615 18658483 BWGD